DRSC/TRiP Functional Genomics Resources

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Protein Alignment ced-3 and Dredd

DIOPT Version :10

Sequence 1:NP_001255708.1 Gene:ced-3 / 178272 WormBaseID:WBGene00000417 Length:503 Species:Caenorhabditis elegans
Sequence 2:NP_477249.3 Gene:Dredd / 31011 FlyBaseID:FBgn0020381 Length:494 Species:Drosophila melanogaster


Alignment Length:286 Identity:73/286 - (25%)
Similarity:114/286 - (39%) Gaps:84/286 - (29%)


- Green bases have known domain annotations that are detailed below.


 Worm   243 GMCLIINNEHF--------------EQMPTRNGTKADKDNLTNLFRCMGYTVICKDNLTGRGMLL 293
            |:.||||.:.|              :.:..|:||..||:.|..:|..|||.|...||:...|::.
  Fly   259 GIALIINQQKFHRNVSRDNMKFLSPDPLRRRDGTDVDKERLIEVFSSMGYNVEAYDNVDHMGIIE 323

 Worm   294 TIRDFAKHESHGDSAILVILSHGEENVIIGVDDIPISTHEIYDLLNAANAPRLANKPKIVFVQAC 358
            .||.........||.::.|||||.|..:...:.|.:...:|.|||  .:...|..|||::.:|||
  Fly   324 RIRSACDRSLVRDSLVVFILSHGFEEAVYASNSIAMKITDIEDLL--CSYDTLYYKPKLLIIQAC 386

 Worm   359 RGERRDNGFPVLDSVDGVPAFLRRGWDNRDGPLFNFLGCVRPQVQQVWRKKPSQ----------- 412
                                                      |.:.|.:|||::           
  Fly   387 ------------------------------------------QEKLVHKKKPNELFRIDVTTVSP 409

 Worm   413 ---ADILIAYATTAQYVSWRNSARGSWFIQAVCEVFSTHAKDMDVVELLT----EVNKKVACGFQ 470
               .|:|.|.:|...|.:.|::..|||||.::|:.....:....:.::||    ||:||      
  Fly   410 DQHIDMLRAMSTVNGYAALRHTQTGSWFIGSLCDAIDRRSASEHIADILTIVTNEVSKK------ 468

 Worm   471 TSQGSNILKQMPEMTSRLLKKFYFWP 496
              :|||....:|.:.|...:..||.|
  Fly   469 --RGSNDESMVPNVKSTFRQHVYFPP 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ced-3NP_001255708.1 CARD 2..90 CDD:128424
CASc 235..496 CDD:214521 72/284 (25%)
DreddNP_477249.3 CASc 252..492 CDD:444667 72/284 (25%)
Blue background indicates that the domain is not in the aligned region.

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