DRSC/TRiP Functional Genomics Resources

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Protein Alignment ceh-13 and lbl

DIOPT Version :10

Sequence 1:NP_498655.1 Gene:ceh-13 / 176069 WormBaseID:WBGene00000437 Length:202 Species:Caenorhabditis elegans
Sequence 2:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster


Alignment Length:161 Identity:51/161 - (31%)
Similarity:64/161 - (39%) Gaps:51/161 - (31%)


- Green bases have known domain annotations that are detailed below.


 Worm    61 ATASGLSPPASRSSNSSA------------------------------ELPTGVTASQHNT---- 91
            |:..|.|..:.|||:|:.                              |.|.|.:.|..:|    
  Fly   157 ASEDGSSERSQRSSSSNGSTECCSPTQAEKVEKRSQEDRMEVPKKSPEEQPKGASKSSGDTPLDA 221

 Worm    92 YKWMHTK---RSQRPAA---------PKKKVIDENGTNRTNFTTHQLTELEKEFHTAKYVNRTRR 144
            ...:.||   ..|.||.         ||||     ..:||.||..|:.||||.|...||::...|
  Fly   222 LFQLSTKNFDEEQDPATLNIFATRSNPKKK-----RKSRTAFTNQQIFELEKRFLYQKYLSPADR 281

 Worm   145 TEIASNLKLQEAQVKIWFQNRRMKEKKREKE 175
            .|||..|.|..|||..||||||.|.|:..:|
  Fly   282 DEIAGGLGLSNAQVITWFQNRRAKLKRDMEE 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ceh-13NP_498655.1 Homeodomain 118..164 CDD:459649 23/45 (51%)
lblNP_001262805.1 COG5576 206..332 CDD:227863 43/112 (38%)
Homeodomain 252..308 CDD:459649 28/55 (51%)

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