DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56c and Obp99c

DIOPT Version :10

Sequence 1:NP_995902.1 Gene:Obp56c / 170882 FlyBaseID:FBgn0046879 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_651711.1 Gene:Obp99c / 43494 FlyBaseID:FBgn0039682 Length:151 Species:Drosophila melanogaster


Alignment Length:142 Identity:26/142 - (18%)
Similarity:50/142 - (35%) Gaps:34/142 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 PPNGTE-NKLSQEMLRACMRRTEISMSQLKLFHMSLMNSDYNNDNDIAPTPVQSIGDVNNLGDLD 116
            |..|.| .|:..:    |::...:|..|:.    .|.|..:.|:.|:......|...:....|  
  Fly    22 PKTGEEIRKIRVD----CLKENPLSNDQIS----QLKNLIFPNEPDVRQYLTCSAIKLGIFCD-- 76

  Fly   117 FNGNSQMPY----------LDLKHNEPLQCFVSCLYETLDLDRYNV--------LLEEAFKNQVQ 163
                 |..|          :||...|.||...||:.:....:..:|        ::.....::|:
  Fly    77 -----QQGYHADRLAKQFKMDLSEEEALQIAQSCVDDNAQKNPTDVWAFRGHQCMMASKIGDKVR 136

  Fly   164 TIIQHEKAEIKE 175
            ..::.:..|.|:
  Fly   137 AFVKAKAEEAKK 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56cNP_995902.1 PBP_GOBP <131..195 CDD:467938 9/53 (17%)
Obp99cNP_651711.1 PBP_GOBP 19..128 CDD:460193 23/120 (19%)

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