DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56c and Obp47a

DIOPT Version :10

Sequence 1:NP_995902.1 Gene:Obp56c / 170882 FlyBaseID:FBgn0046879 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_610632.1 Gene:Obp47a / 36162 FlyBaseID:FBgn0033573 Length:165 Species:Drosophila melanogaster


Alignment Length:200 Identity:50/200 - (25%)
Similarity:83/200 - (41%) Gaps:51/200 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 IFYISFTRSLSVSLNMSMTRTLVPDPPNGTENKLSQEMLRACMRRTEISMSQLKLFHMSLMNSDY 92
            :|.:|.:|...:::|:.:|   |.|....|   :::||:|.|..:|:||:.:|            
  Fly    13 MFALSESRFAKININLGLT---VADESPKT---ITEEMIRLCGDQTDISLREL------------ 59

  Fly    93 NNDNDIAPTPVQSIGDVNNLGDLDFNGNSQMPYLDLKHNEPLQCFVSCLYETLDLDRYNVLLEEA 157
                             |.|...||:..|          |.:|||..||||.:.|....|.:|..
  Fly    60 -----------------NKLQREDFSDPS----------ESVQCFTHCLYEQMGLMHDGVFVERD 97

  Fly   158 FKNQVQTIIQHEKAEIKECSDLQGKTRCEAAYKLHLCYNHLKTLEAEQRIREILERTEAENEGFG 222
            ....:..:...:....::|..::|..:||.||::|.|...||     |:.:.:|...|.| ....
  Fly    98 LFGLLSDVSNTDYWPERQCHAIRGNNKCETAYRIHQCQQQLK-----QQQQNLLATKEVE-VTTT 156

  Fly   223 PEGSD 227
            |.|||
  Fly   157 PAGSD 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56cNP_995902.1 PBP_GOBP <131..195 CDD:467938 18/63 (29%)
Obp47aNP_610632.1 PhBP 44..132 CDD:214783 29/126 (23%)

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