DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Obp56c and Obp19d

DIOPT Version :10

Sequence 1:NP_995902.1 Gene:Obp56c / 170882 FlyBaseID:FBgn0046879 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_523421.2 Gene:Obp19d / 33040 FlyBaseID:FBgn0011280 Length:150 Species:Drosophila melanogaster


Alignment Length:91 Identity:22/91 - (24%)
Similarity:41/91 - (45%) Gaps:12/91 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 DLKHNEPLQCFVSCLYETLD-LDRYNVLLEEAFKNQVQTIIQH--EKAE-----IKECSDLQ-GK 182
            ||......:|..:|:.:.|. :|....|.:|.....|:.:.:|  ||.:     :.:|..:: .:
  Fly    59 DLPERHEAKCLRACVMKKLQIMDESGKLNKEHAIELVKVMSKHDAEKEDAPAEVVAKCEAIETPE 123

  Fly   183 TRCEAAYKLHLC-YNHLKT--LEAEQ 205
            ..|:||:....| |..:|.  ||.|:
  Fly   124 DHCDAAFAYEECIYEQMKEHGLELEE 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56cNP_995902.1 PBP_GOBP <131..195 CDD:467938 15/73 (21%)
Obp19dNP_523421.2 PBP_GOBP 26..139 CDD:460193 18/79 (23%)

Return to query results.
Submit another query.