DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56c and Obp19c

DIOPT Version :10

Sequence 1:NP_995902.1 Gene:Obp56c / 170882 FlyBaseID:FBgn0046879 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_608392.1 Gene:Obp19c / 33039 FlyBaseID:FBgn0031111 Length:175 Species:Drosophila melanogaster


Alignment Length:164 Identity:30/164 - (18%)
Similarity:51/164 - (31%) Gaps:64/164 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 PPNGTENKLS---------QEMLRA----CMRRTEISMSQLKLFHMSLMNSDYNNDNDIAPTPVQ 104
            |..|||...:         ||::.|    |:::.::                        |...:
  Fly    40 PKTGTEPIWAVIDRNLPQVQELVTAARMECIQKLQL------------------------PRDQR 80

  Fly   105 SIGDVNNLGDLDFNGNSQMPYLDLKHNEPLQCFVSCLYETLDL-DRYNVLLEEAFKNQVQTIIQH 168
            .:|.|.|                  .:|..:|.|.|:.:.:.| |..|.|.....:.....:.|.
  Fly    81 PLGKVTN------------------PSEKEKCLVECVLKKIKLMDADNKLNVGQVEKLTSLVTQD 127

  Fly   169 EKAEI-------KECS-DLQGKTRCEAAYKLHLC 194
            .|..|       :.|| .:..|..||.|:..:.|
  Fly   128 NKMAIAVSSSMAQACSRGISSKNPCEVAHLFNQC 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56cNP_995902.1 PBP_GOBP <131..195 CDD:467938 18/73 (25%)
Obp19cNP_608392.1 PhBP 65..164 CDD:214783 23/139 (17%)

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