DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56c and Obp19b

DIOPT Version :10

Sequence 1:NP_995902.1 Gene:Obp56c / 170882 FlyBaseID:FBgn0046879 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_608391.2 Gene:Obp19b / 33038 FlyBaseID:FBgn0031110 Length:163 Species:Drosophila melanogaster


Alignment Length:182 Identity:39/182 - (21%)
Similarity:70/182 - (38%) Gaps:53/182 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 MLRACMRRTEISMSQLKL---FHMSLMNSDYNNDNDIAPTP------VQSIGDV-------NNLG 113
            |::.....|.:.|:.|.|   ....||.|...::.:.:.|.      ::..||.       .|:.
  Fly     1 MMQCSRMTTTLKMTNLLLAVACAAVLMGSATADEEEGSMTVDEVVELIEPFGDACTPKPSRENIV 65

  Fly   114 DLDFNGNSQMPYLDLKHNEPLQCFVSCLYETLDL--------------DRYNVLL---EEAFKNQ 161
            ::..|..      |.||.  .:||..|:.|..:|              |..|::.   |:..:..
  Fly    66 EMVLNKE------DAKHE--TKCFRHCMLEQFELMPEDQLQYNEDKTVDMINMMFPDREDDGRRI 122

  Fly   162 VQTIIQHEKAEIKECSDLQGKTRCEAAYKLHLCYNHLKTLEAEQ-RIREILE 212
            |:|..:..|||         :.:||||:.:.:|.  |:.:.:.. :|.||.|
  Fly   123 VKTCNEELKAE---------QDKCEAAHGIAMCM--LREMRSSGFKIPEIKE 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56cNP_995902.1 PBP_GOBP <131..195 CDD:467938 17/80 (21%)
Obp19bNP_608391.2 PBP_GOBP 39..150 CDD:460193 27/129 (21%)

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