DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56c and Obp56i

DIOPT Version :10

Sequence 1:NP_995902.1 Gene:Obp56c / 170882 FlyBaseID:FBgn0046879 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_725929.1 Gene:Obp56i / 246667 FlyBaseID:FBgn0043532 Length:140 Species:Drosophila melanogaster


Alignment Length:109 Identity:28/109 - (25%)
Similarity:47/109 - (43%) Gaps:20/109 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 DVNNLGDLDFNGNSQMPYLDLKHNEPLQCFVSCLYETLDLDRYNVLLEEAFKNQVQTIIQHEKAE 172
            ||.|..:.|..|:|            ::||..|..|.:.:...|.::..||...:..|:..|..|
  Fly    40 DVANRHETDDPGHS------------VKCFFRCFLENIGIIADNQIIPGAFDRVLGHIVTAEAVE 92

  Fly   173 IKE--CSDLQGKT----RCEAAYKLHLCYN--HLKTLEAEQRIR 208
            ..|  |:.::.:|    .||.|:::..||.  .|..::..||.|
  Fly    93 RMEATCNMIKSETSHDESCEFAWQISECYEGVRLSDVKKGQRTR 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56cNP_995902.1 PBP_GOBP <131..195 CDD:467938 16/69 (23%)
Obp56iNP_725929.1 PBP_GOBP 25..121 CDD:460193 22/92 (24%)

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