Protein Alignment Hoxd1 and unpg

DIOPT Version :10

• Sequence 1: NP_034597.2
• Gene: Hoxd1 / 15429
• MGIID: 96201
• Length: 328
• Species: Mus musculus
• Sequence 2: NP_477146.1
• Gene: unpg / 35942
• FlyBaseID: FBgn0015561
• Length: 485
• Species: Drosophila melanogaster
• Alignment Length: 343
• Identity: 90/343 - (26%)
• Similarity: 120/343 - (34%)
• Gaps: 89/343 - (25%)

Mouse    20 GGDVLGFAPKFCRADARPVALQPAFPLGSGDGAFVSCLPLATARPTPSPPAGPA-----QSP--V 77
            ||..|..:|.     ..|.|.||.                |.|:|.|.||..|.     |.|  :
  Fly   106 GGCYLPSSPA-----GHPAAQQPQ----------------AQAQPQPPPPHPPTHALEKQLPPTL 149

Mouse    78 PQPAAPRYAPCTLEGAYERGAAPASAAEYGFLGSGPAFDFPGALGRAADEGGAHVHYATSAVFSG 142
            |.|...|:.|.....|   |.||...: |..|......|:..:|.         ||.....:.:.
  Fly   150 PHPLDTRFLPFNPAAA---GVAPTDLS-YRRLAELMNQDYVHSLS---------VHARLQHMAAA 201

Mouse   143 GGSFLLSGQVDFAAFGEPGPFPACLKEPADGHPGPFQTVSPAPGA-------CPKPASPTSSLPA 200
            |...........|...||.| |.....||..  |....:.||...       |...:....||..
  Fly   202 GRMHEDQANPGMAQLQEPTP-PQAHSSPAKS--GSHSPMEPALDVGMDEDFECSGDSCSDISLTM 263

Mouse   201 AHSTFEW-MKVKRNAP--------------------------KKSKLSEYGATSPPSAIRTNFST 238
            :...:.. |...||..                          |.|:.:...:.|.....||.|::
  Fly   264 SPRNYNGEMDKSRNGAYTNSDSEDCSDDEGAQSRHEGGGMGGKDSQGNGSSSNSKSRRRRTAFTS 328

Mouse   239 KQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQVKIWFQNRRMKQKKREREGLLATAASVASIK 303
            :||.|||:|||..|||:...|.:||..|:|::.||||||||||.|.|:        ..|.:.|..
  Fly   329 EQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKR--------VKAGLTSHG 385

Mouse   304 LPRSETSPIKSGRNLGSP 321
            |.|:.|:   ||..:..|
  Fly   386 LGRNGTT---SGTKIVVP 400

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxd1	NP_034597.2	PRK12323	<11..217	CDD:481241	48/237 (20%)
		Antp-type hexapeptide	204..209		0/5 (0%)
		Homeodomain	233..286	CDD:459649	30/52 (58%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	304..328		6/18 (33%)
unpg	NP_477146.1	Homeodomain	324..376	CDD:459649	29/51 (57%)