DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxb9 and toy

DIOPT Version :9

Sequence 1:NP_032296.2 Gene:Hoxb9 / 15417 MGIID:96190 Length:250 Species:Mus musculus
Sequence 2:NP_001368990.1 Gene:toy / 43833 FlyBaseID:FBgn0019650 Length:655 Species:Drosophila melanogaster


Alignment Length:86 Identity:25/86 - (29%)
Similarity:37/86 - (43%) Gaps:14/86 - (16%)


- Green bases have known domain annotations that are detailed below.


Mouse   163 GSEDKERPDQTNPSANWLHARSSRK---KRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNL 224
            |.||.:           :..|..||   .|..::..|...|||||....|.....|..:|..:.|
  Fly   251 GDEDSQ-----------MRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGL 304

Mouse   225 SERQVKIWFQNRRMKMKKMNK 245
            .|.::::||.|||.|.::..|
  Fly   305 PEARIQVWFSNRRAKWRREEK 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxb9NP_032296.2 Hox9_act 1..172 CDD:398350 3/8 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 21..48
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 160..182 3/18 (17%)
Homeobox 188..242 CDD:395001 18/53 (34%)
toyNP_001368990.1 PAX 29..153 CDD:128645
COG5576 <253..368 CDD:227863 24/84 (29%)
Homeobox 269..322 CDD:395001 18/52 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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