DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hoxb9 and lbe

DIOPT Version :10

Sequence 1:NP_032296.2 Gene:Hoxb9 / 15417 MGIID:96190 Length:250 Species:Mus musculus
Sequence 2:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster


Alignment Length:312 Identity:85/312 - (27%)
Similarity:114/312 - (36%) Gaps:83/312 - (26%)


- Green bases have known domain annotations that are detailed below.


Mouse     2 SISGTLSSYYVDSIISHESED--------------APPAK---FPSGQYANPR------QPGHAE 43
            :|.| :.|:.:..|:.|..:.              ||||.   .|||....||      .|..|.
  Fly   127 AIEG-VKSFSIADILGHSEKQREESVSPPPNANLLAPPASRPIAPSGGLLQPRTEPLDVHPAAAA 190

Mouse    44 HLDFPSCS--------FQPKAPVFGASWAPLSP----HASGSLPSVYHPYLQPQGAPAAESRYLR 96
            .:..||..        ..|..||     .|..|    |....|...||..||...  .|:::.||
  Fly   191 AMLLPSGQIVRPWDHLLGPTMPV-----RPFIPSALLHYEQRLALDYHRQLQEHF--NAQAQLLR 248

Mouse    97 -TWLEPA------------PRAEAAPGQGQA-----AVKAEPLLGAPGELLKQGTPEYSLETSAG 143
             ..:.||            .|:.::.|..:.     |.|.|.|....|....|........|.:|
  Fly   249 HMGMNPAIIASEDGSSERSQRSSSSNGSTECCSPRQAEKLEKLTTQEGSEEAQKKKSEEQPTGSG 313

Mouse   144 REAVLSNQRAGYGD----------NKICEGSEDKERPDQTNPSANWLHARSSRKKRCPYTKYQTL 198
            :    ||     ||          .|..:.|:||...|   ..:|....:..||.|..:|.:|..
  Fly   314 K----SN-----GDTPLDALFQMTTKDFDESQDKSHLD---IFSNRPQPKKKRKSRTAFTNHQIF 366

Mouse   199 ELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKKMNKEQGKE 250
            ||||.||:..||:...|.|:|..|.||..||..||||||.|.|:..:|..|:
  Fly   367 ELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRDIEELKKD 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxb9NP_032296.2 Hox9_act 1..172 CDD:461369 52/232 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 21..48 11/49 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 160..182 5/21 (24%)
Homeodomain 186..242 CDD:459649 28/55 (51%)
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 28/55 (51%)

Return to query results.
Submit another query.