DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxb9 and zen

DIOPT Version :9

Sequence 1:NP_032296.2 Gene:Hoxb9 / 15417 MGIID:96190 Length:250 Species:Mus musculus
Sequence 2:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster


Alignment Length:79 Identity:41/79 - (51%)
Similarity:50/79 - (63%) Gaps:3/79 - (3%)


- Green bases have known domain annotations that are detailed below.


Mouse   164 SEDKERPDQTNPSANWLHARSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQ 228
            |.|:..|.|.|..:..:..:.|   |..:|..|.:|||.||..||||.|.||.|:|:.|:|.|||
  Fly    72 SSDENLPSQPNHDSQRVKLKRS---RTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQ 133

Mouse   229 VKIWFQNRRMKMKK 242
            |||||||||||.||
  Fly   134 VKIWFQNRRMKFKK 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxb9NP_032296.2 Hox9_act 1..172 CDD:398350 3/7 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 21..48
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 160..182 5/17 (29%)
Homeobox 188..242 CDD:395001 33/53 (62%)
zenNP_476793.1 Homeobox 93..146 CDD:278475 34/55 (62%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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