DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxb9 and exex

DIOPT Version :10

Sequence 1:NP_032296.2 Gene:Hoxb9 / 15417 MGIID:96190 Length:250 Species:Mus musculus
Sequence 2:NP_648164.1 Gene:exex / 38884 FlyBaseID:FBgn0041156 Length:525 Species:Drosophila melanogaster


Alignment Length:250 Identity:70/250 - (28%)
Similarity:86/250 - (34%) Gaps:81/250 - (32%)


- Green bases have known domain annotations that are detailed below.


Mouse    17 SHESEDAPPAKFPSGQYANPRQPGHAEHLDFPSCSFQPKAPVFGASWAPLSPHA----------S 71
            ||.|  :||..........|....|.:||......|..:..      .|:.||:          :
  Fly   314 SHRS--SPPISPGCEDQQQPHGALHPQHLSMRMSDFHDEFK------KPIPPHSPIRPQDFPLYA 370

Mouse    72 GSLP--------SVYHPYLQPQGAPAAESRYLRTWLEPAPRA-EAAPGQGQAAVKAEPLLGAPGE 127
            |..|        |.:|..|.|.|.|.           |.|.. ...|.|.|....|.      ..
  Fly   371 GGHPYQLLAQGGSAFHRPLDPSGKPI-----------PIPMGHNFMPSQLQFEFLAR------AG 418

Mouse   128 LLKQGTPEYSLETSAGREAVLSNQRAGYGDNKICEGSEDKERPDQTNPSANWLHARSSRKKRCPY 192
            :|....||.                |.|..:.|                     ...:|:.|..:
  Fly   419 MLHHRIPEL----------------AAYPHHAI---------------------LGKTRRPRTAF 446

Mouse   193 TKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKKMNKEQ 247
            |..|.|||||:|..|.||:|.:|.|||..|.|||.||||||||||||.|:..|.|
  Fly   447 TSQQLLELEKQFKQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRMKWKRSKKAQ 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxb9NP_032296.2 Hox9_act 1..172 CDD:461369 33/173 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 21..48 6/26 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 160..182 1/21 (5%)
Homeodomain 186..242 CDD:459649 34/55 (62%)
exexNP_648164.1 Homeodomain 440..496 CDD:459649 34/55 (62%)

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