Protein Alignment Hoxb9 and cad

DIOPT Version :10

• Sequence 1: NP_032296.2
• Gene: Hoxb9 / 15417
• MGIID: 96190
• Length: 250
• Species: Mus musculus
• Sequence 2: NP_001260641.1
• Gene: cad / 35341
• FlyBaseID: FBgn0000251
• Length: 445
• Species: Drosophila melanogaster
• Alignment Length: 259
• Identity: 68/259 - (26%)
• Similarity: 93/259 - (35%)
• Gaps: 100/259 - (38%)

Mouse    22 DAPPAKFPSGQYANPRQPGHAEHL--DFPSCSFQPKAPVFGASWAPLSPHASGSLPSVYHPYLQP 84
            |..|...|         |.|.:|:  ..||    |...|.|:..:  ||.|..|..|.:|.....
  Fly   160 DGGPGSAP---------PNHQQHIAEGLPS----PPITVSGSEIS--SPGAPTSASSPHHHLAHH 209

Mouse    85 QGAPA-----------------------AESRYLRT---------WLEPAPRAEAAPGQGQAAVK 117
            ..|.|                       :.|...||         |:    :..|.|.|.|..:.
  Fly   210 LSAVANNNNNNNNNNNSPSTHNNNNNNNSVSNNNRTSPSKPPYFDWM----KKPAYPAQPQPDLS 270

Mouse   118 AEPLLGAPGELLKQGTPEYSLETSAGREAVLSNQRAGYGDNKICEGSEDKERPDQTNPSANWLHA 182
            :.|.|....:||          .::|:                                     .
  Fly   271 SSPNLEDLSDLL----------DASGK-------------------------------------T 288

Mouse   183 RSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKKMNKE 246
            |:..|.|..||.:|.||||||:..:.|:|..|:.|:|:.|:||||||||||||||.|.:|.||:
  Fly   289 RTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQNKK 352

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxb9	NP_032296.2	Hox9_act	1..172	CDD:461369	32/183 (17%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	21..48		6/27 (22%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	160..182		0/21 (0%)
		Homeodomain	186..242	CDD:459649	32/55 (58%)
cad	NP_001260641.1	Homeodomain	293..348	CDD:459649	32/54 (59%)