DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxb1 and zen2

DIOPT Version :10

Sequence 1:XP_006532343.1 Gene:Hoxb1 / 15407 MGIID:96182 Length:330 Species:Mus musculus
Sequence 2:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster


Alignment Length:101 Identity:45/101 - (44%)
Similarity:55/101 - (54%) Gaps:11/101 - (10%)


- Green bases have known domain annotations that are detailed below.


Mouse   236 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREGGRMPAG 300
            ||.|::.||.|||:|||.||||:|.||:||:..|.|.|.||||||||||||.||.....|.:.|.
  Fly    47 RTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKKSTNRKGAIGAL 111

Mouse   301 PPGCPKEAAGDASDQS-----------ACTSPEASP 325
            ....|..:......|.           |.|:.|.:|
  Fly   112 TTSIPLSSQSSEDLQKDDQIVERLLRYANTNVETAP 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxb1XP_006532343.1 Homeodomain 236..289 CDD:459649 35/52 (67%)
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 35/52 (67%)

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