DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Hoxa10 and unpg

Sequence 1:NP_032289.2 Gene:Hoxa10 MGIID:96171 Length:416 Species:Mus musculus
Sequence 2:NP_477146.1 Gene:unpg FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster

Alignment Length:311 Identity:78/312 (25%)
Similarity:114/312 (37%) Gaps:87/312 (28%)


Mouse   130 PPDGPPPPQPQPQQQQQQPPPPPP------QPPQPQPQATSCSFAQNIKEESSYCLYDAADKCPK 188
            |...|...|||.|.|.|.|||.||      |.|...|......|                  .|.
  Fly   114 PAGHPAAQQPQAQAQPQPPPPHPPTHALEKQLPPTLPHPLDTRF------------------LPF 160

Mouse   189 GSAAADLAPFPRGPPPDGCALGASSGVPVPGYFRLSQ-----------AYGTAKGFGSGGGGTQQ 242
            ..|||.:||...                  .|.||::           .:...:...:.|...:.
  Fly   161 NPAAAGVAPTDL------------------SYRRLAELMNQDYVHSLSVHARLQHMAAAGRMHED 207

Mouse   243 LASPFPAQPPGRGFDPPPALASGSTEAAGK----ERVLDSTPPPTLVCTGGGGS----------- 292
            .|:|..||..    :|.|..|..|...:|.    |..||........|:|...|           
  Fly   208 QANPGMAQLQ----EPTPPQAHSSPAKSGSHSPMEPALDVGMDEDFECSGDSCSDISLTMSPRNY 268

Mouse   293 --QGDEEAHASSSAAEELSPAPSENSKASPE------KDSLGSSKGENAANWLTAKSGRKKRCPY 349
              :.|:..:.:.:.::....:..|.:::..|      |||.|:....|:       ..|::|..:
  Fly   269 NGEMDKSRNGAYTNSDSEDCSDDEGAQSRHEGGGMGGKDSQGNGSSSNS-------KSRRRRTAF 326

Mouse   350 TKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKM 400
            |..|.||||:||....||:...|.:|:.|:.|::.||||||||||.|.|::
  Fly   327 TSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKRV 377

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Hoxa10NP_032289.2 Homeobox 345..398 CDD:278475 26/53 (49%)
unpgNP_477146.1 Homeobox 324..375 CDD:278475 25/51 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 0.667 Consistency score
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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