DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hcn2 and CG42260

DIOPT Version :10

Sequence 1:NP_032252.1 Gene:Hcn2 / 15166 MGIID:1298210 Length:863 Species:Mus musculus
Sequence 2:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster


Alignment Length:861 Identity:201/861 - (23%)
Similarity:323/861 - (37%) Gaps:237/861 - (27%)


- Green bases have known domain annotations that are detailed below.


Mouse    45 TTPSHPESADEP---GPRARLCSRDSACTPGAAKGGANGECGRGEPQCSPEGPARGPKVSFSCRG 106
            |...||.:...|   ||..          ||...||            .|..|..|        |
  Fly   497 TVSHHPHAHGPPSQGGPGG----------PGPPHGG------------HPHHPHHG--------G 531

Mouse   107 AASGPSAAEEAGSEEAGPAGEPRGSQASFLQRQFGALLQPGVNKFSLRMFGSQKAVEREQERVKS 171
            |.||      .||......|:|.                            .||......:|:::
  Fly   532 AGSG------GGSGPGSHGGQPH----------------------------HQKPRRTASQRIRA 562

Mouse   172 AGA-----WIIHPYSDFRFYWDFTMLLFMVGNLIIIPVGITF--FKDETTAPWIVFNVVSDTFFL 229
            |.|     ::..|.....:||...:.:..:.|..:|.....|  ....|.|.|...:.:||..:|
  Fly   563 ATAARKLHFVFDPAGRLCYYWSMVVSMAFLYNFWVIIYRFAFQEINRRTIAIWFCLDYLSDFLYL 627

Mouse   230 MDLVLNFRTGIVIEDNTEIILDPEKIKKKYLR-TWFVVDFVSSIPVDYIFLIVEKGIDSEVYKTA 293
            :|::.:|||| .:||.. :..|..|::..|:. |.|.:|.:..:|:|:::|              
  Fly   628 IDILFHFRTG-YLEDGV-LQTDALKLRTHYMNSTIFYIDCLCLLPLDFLYL-------------- 676

Mouse   294 RALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVMRICNLISMMLLLCHWDGCLQ 358
                .:.|..||...||:::.|...::.:.|.  |..|   ..:.|...||..:|::.||:|||.
  Fly   677 ----SIGFNSILRSFRLVKIYRFWAFMDRTER--HTNY---PNLFRSTALIHYLLVIFHWNGCLY 732

Mouse   359 FLVPMLQDFPSDCWVSINN---------MVNHSWSELYSFALFKAMSHMLCIGYGRQAPESMTDI 414
            .::.....|.|..||..::         :.::.|..|          .:..|| ....|.|..:.
  Fly   733 HIIHKNNGFGSRNWVYHDSESADVVKQYLQSYYWCTL----------ALTTIG-DLPKPRSKGEY 786

Mouse   415 WLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADFRQKIHDYYEH 479
            ...:|.::.|...:|..:||...::.|:.::|:::|.|...|:.||...::|...:.|:..::::
  Fly   787 VFVILQLLFGLMLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNHLQVKVIKWFDY 851

Mouse   480 RY-QGKMFDEDSILGELNGPLREEI-VNFNCRKLVASMPLFANADPNFVTAMLTKLKFEVFQPGD 542
            .: ..|..||:..:..|...|:.|| :|.:...| ..:.:|.|.:..|:..::.:|:..:|.|||
  Fly   852 LWLTQKCSDEERAVSCLPDKLKAEIAINVHLDTL-KRVEIFQNTEAGFLCELVLRLRPVLFSPGD 915

Mouse   543 YIIREGTIGKKMYFIQHGVVSVLTKGNKEM--KLSDGSYFGEICLLTRG----RRTASVRADTYC 601
            ||.|:|.:||:||.:..|.:.|:....|.:  .|..|||||||.:|..|    |||||||:..|.
  Fly   916 YICRKGEVGKEMYIVNRGRLQVVADNGKTVMASLKAGSYFGEISILNMGTAGNRRTASVRSVGYS 980

Mouse   602 RLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILLHKVQHDLSSGVFNNQENAIIQE 666
            .|:.||..:..:||:|||..|...|::|:.||::..|..   |.||::      ||         
  Fly   981 DLFVLSKKDMWDVLKEYPAARVRLESIAVKRLEKYKKAP---LEKVKY------FN--------- 1027

Mouse   667 IVKYDREMVQQAELGQRVGLFPPPPPPQVTSAIATLQQAVAMSFCPQVARPLVGPLALGSPRLVR 731
                                                  .|||..|.            .:|.||.
  Fly  1028 --------------------------------------VVAMGRCQ------------STPGLVE 1042

Mouse   732 RAPPGP-----LPPAASPGPP-----AASPPAAPSSPRAPRTSPYGVPGSPATRVGPALPARRLS 786
            ......     ||||.:....     .|......:|.:.|.........|......|...|.||:
  Fly  1043 SCGRTSLEEMWLPPATAGASSLMHHHQALQQQHQASQQQPHRQESTQTSSQTHGYSPRSYADRLA 1107

Mouse   787 RASRPLSASQPSLPHGVPAPSPAASARPASSST------PRLGPAPTARTAAPSPDRRDSASP-- 843
            ||:....:..|| .||       :..||.|.:|      |:..|:.|....       ||:|.  
  Fly  1108 RATDSPRSVSPS-AHG-------SEERPRSRTTSHHSIRPQSQPSHTGHIC-------DSSSQLE 1157

Mouse   844 -------GAASGLDPL 852
                   ||..|..||
  Fly  1158 CYGAGVGGAGGGTTPL 1173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hcn2NP_032252.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..131 21/88 (24%)
Involved in subunit assembly 131..182 6/55 (11%)
Ion_trans_N 140..182 CDD:400630 6/46 (13%)
PLN03192 175..>661 CDD:215625 135/505 (27%)
CAP_ED 517..625 CDD:237999 46/113 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 730..863 34/148 (23%)
PRK07003 <769..>862 CDD:235906 26/99 (26%)
CG42260NP_001356969.1 Ion_trans 581..820 CDD:459842 62/274 (23%)
CAP_ED 890..1004 CDD:237999 46/113 (41%)

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