Sequence 1: | NP_001106796.1 | Gene: | Gria1 / 14799 | MGIID: | 95808 | Length: | 907 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_648455.2 | Gene: | Ir68a / 39269 | FlyBaseID: | FBgn0036150 | Length: | 704 | Species: | Drosophila melanogaster |
Alignment Length: | 822 | Identity: | 151/822 - (18%) |
---|---|---|---|
Similarity: | 284/822 - (34%) | Gaps: | 254/822 - (30%) |
- Green bases have known domain annotations that are detailed below.
Mouse 104 LHVCFIT----PSFPVDTSNQ-----FVLQLRPELQEALISIIDHYKW-----QTFVYIYDADRG 154
Mouse 155 LSVLQRVLDTAAEKNWQVTAVNILTTTEEGYRMLFQDLEKKKERLVVV-------DCESERLNAI 212
Mouse 213 LG-QIVKLEKNGIGYHYILANLGFMDIDLNKFKESGANVTGFQLVNYTDTIPARIMQQWRT-SDA 275
Mouse 276 RDHTRVDWKRP---KYT-SALTY----DGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWG 332
Mouse 333 QGIDIQRALQQVRFEGLTGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQA 397
Mouse 398 GGDNSSVQNRTYIVTTILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYS---YR---- 455
Mouse 456 -------LEIVSDGKYGARDPDTKAWNG------MVGELVYGRADVAVAPLTITLVREEVIDFSK 507
Mouse 508 PFMSLGISIMIKKPQKSKPGVF-SFLDPLAYEIWMCIVFAYIGVSVVLFLVS------------- 558
Mouse 559 -----------RFSPYEWHSEEFEEGRDQTTSDQSNEF------GIFNSLWFSLGAFMQQGCDIS 606
Mouse 607 PRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGST-- 669
Mouse 670 KEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCDT 734
Mouse 735 MKVGGNLDSKGYG--------------IATPKGSALRGPVNLAVLKLSEQGVLDKLKSKWWYDKG 785
Mouse 786 ECGSKDSGSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIE 827 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Gria1 | NP_001106796.1 | PBP1_iGluR_AMPA_GluR1 | 26..389 | CDD:107385 | 57/315 (18%) |
ANF_receptor | 37..372 | CDD:279440 | 57/298 (19%) | ||
PBP2_iGluR_AMPA_GluR1 | 406..787 | CDD:270447 | 84/447 (19%) | ||
Glutamate binding. /evidence=ECO:0000250 | 492..494 | 0/1 (0%) | |||
Lig_chan | 538..817 | CDD:278489 | 56/324 (17%) |