DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgk1 and gem

DIOPT Version :10

Sequence 1:NP_725875.3 Gene:Rgk1 / 14462605 FlyBaseID:FBgn0264753 Length:1379 Species:Drosophila melanogaster
Sequence 2:NP_001090822.1 Gene:gem / 100038040 XenbaseID:XB-GENE-483370 Length:299 Species:Xenopus tropicalis


Alignment Length:370 Identity:103/370 - (27%)
Similarity:159/370 - (42%) Gaps:90/370 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  1021 RPNQLCLPQQRSRVASMPNTGVEEEYYRLRHFSITGKGVVNRGDSLKSRRSRSNNSVASSNSSTE 1085
            |.|.....|||   .|:|.........:.:|.::|             |:..:||:  |.|:|.|
 Frog     9 RSNTTANVQQR---WSIPADAKNIHAQKKQHSNLT-------------RKYTANNT--SINNSAE 55

  Fly  1086 HLTTQQQLSAPASVSARTSLASSRESS--TSNPGNGPYRVLMLGGPAVGKSSLVSQFMTSEYLHA 1148
            :              .|.|.:|....|  :|..|:..|||:::|...||||:|.:.|.      .
 Frog    56 Y--------------CRRSWSSDSSDSVISSESGSTYYRVVLIGEQGVGKSTLANIFA------G 100

  Fly  1149 YDTSIDDESGEKAV-----SVLLSGEESELIFID----HGYTEMTPDECLTNYDPHGYCVIYSAA 1204
            ...|:|.:....|.     ::::.||.:.||.||    ........::|:...|  .|.::||..
 Frog   101 VPDSVDGDCDMLAENTYERNLMVDGESATLILIDMWENKAQDNWIREQCMQVGD--AYLIVYSIT 163

  Fly  1205 DRSSFSVAEQVLQVLWTNQNIAQKAVILVSNKADLARSRLVTSEEGKAMATAYDCKFIETSVGIN 1269
            ||:||..|.::...|...:......:|||.||:||.|.|.|:..||:|.|..:||||||||..:.
 Frog   164 DRASFEKASELRIQLRRARQTEDIPIILVGNKSDLVRCREVSVSEGRACAVVFDCKFIETSAAVQ 228

  Fly  1270 HNVDELLVGLLSQIRLKLENPEKSRDLFRKRSIRKSKRRACSPLNAGCLNANTPLGPLGEAVATP 1334
            |||.||..|::.|:||:.::.||:     :|.:...|||...|..|                   
 Frog   229 HNVKELFEGIVRQVRLRRDSKEKN-----ERRLAYQKRRESIPKKA------------------- 269

  Fly  1335 PGSAQSSPRKYRGSRTSTSLKVKGLLGRVWTRDSKSKSCENLHVL 1379
                    |::.|.  ..:.|.|.:..::     |||||.:|.||
 Frog   270 --------RRFWGK--IVAKKNKNMAFKL-----KSKSCHDLSVL 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rgk1NP_725875.3 DUF2967 16..899 CDD:402654
P-loop containing Nucleoside Triphosphate Hydrolases 1121..1379 CDD:476819 79/266 (30%)
gemNP_001090822.1 RGK 79..299 CDD:206715 79/266 (30%)
Blue background indicates that the domain is not in the aligned region.

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