DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG43342 and Gpdh2

Sequence 1:NP_001247238.1 Gene:CG43342 FlyBaseID:FBgn0263047 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_611760.2 Gene:Gpdh2 FlyBaseID:FBgn0034825 Length:358 Species:Drosophila melanogaster

Alignment Length:161 Identity:31/162 (19%)
Similarity:51/162 (31%) Gaps:58/162 (36%)


  Fly     2 WNTS-------NVYDETTSENGDNEEQKASYIKEDHIETERKSLLLIKRNNVALQKRQLPYSRPT 59
            |.|:       ||.:..|.     :|:...|:.|:.:|..:.:.::   |...:..:.:|.....
  Fly    14 WATTIARNVGRNVLNSQTL-----DEKVPMYVYEEIVEGRKLTEII---NTTHINSKYMPNFELP 70

  Fly    60 PQNRQELVESIEQDRKVLSAYFKRLSSQRDEVTSPNAAPPAADSPVPQRNSYDLFFESACISVKG 124
            |.               :.|....:::.||......|.||.             |..|.|.::.|
  Fly    71 PN---------------IVAVDDIVTTARDADIIIFAIPPT-------------FVSSCCKTLLG 107

  Fly   125 LPPKLAAEAKS--------------RISQII 141
             ..|..|.|.|              .|||||
  Fly   108 -KVKPTAHAVSLIKGFERGDDGQFVLISQII 137

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG43342NP_001247238.1 BESS 109..143 CDD:281011 13/48 (27%)
Gpdh2NP_611760.2 glycerol3P_DH 6..342 CDD:274551 31/162 (19%)
NAD_Gly3P_dh_N 6..174 CDD:279543 31/162 (19%)
NAD_Gly3P_dh_C 198..336 CDD:284817
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 0 Normalized mean entropy S475
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
10.950

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