DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG43342 and Gpdh1

Sequence 1:NP_001247238.1 Gene:CG43342 FlyBaseID:FBgn0263047 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_001260112.1 Gene:Gpdh1 FlyBaseID:FBgn0001128 Length:360 Species:Drosophila melanogaster

Alignment Length:87 Identity:18/88 (20%)
Similarity:37/88 (42%) Gaps:15/88 (17%)


  Fly    11 TTSENGDNEEQKASYIKEDHIETERKSLLLIKRNNVALQKRQLPYSRPTPQNRQELVES--IEQD 73
            ||...|.|.....:::      |..|::..:::..:..||.|.|   ||.:....::::  :|..
  Fly   264 TTCYGGRNRRVSEAFV------TSGKTIEELEKEMLNGQKLQGP---PTAEEVNYMLKNKGLEDK 319

  Fly    74 RKVLSAYFKRLSSQRDEVTSPN 95
            ..:.:|..|..::|    ..||
  Fly   320 FPLFTAIHKICTNQ----LKPN 337

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG43342NP_001247238.1 BESS 109..143 CDD:281011
Gpdh1NP_001260112.1 glycerol3P_DH 6..343 CDD:274551 18/88 (20%)
NAD_Gly3P_dh_N 7..175 CDD:279543
NAD_Gly3P_dh_C 202..337 CDD:284817 17/86 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 0 Normalized mean entropy S475
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
10.950

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