DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG43342 and gpdh-2

Sequence 1:NP_001247238.1 Gene:CG43342 FlyBaseID:FBgn0263047 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_871632.1 Gene:gpdh-2 WormBaseID:WBGene00010778 Length:392 Species:Caenorhabditis elegans

Alignment Length:107 Identity:25/108 (23%)
Similarity:35/108 (32%) Gaps:31/108 (29%)


  Fly    16 GDNEEQKASYIKEDHIETERKSLLLIKRNNVALQKRQLPYSRPTPQNRQELVESI---------- 70
            |||  .||:.|:...:||.:            ..:...|.|     |.|...||.          
 Worm   264 GDN--TKAAVIRLGLMETTK------------FVEHYYPGS-----NLQTFFESCGIADLITTCY 309

  Fly    71 -EQDRKVLSAYFKRLSSQRDEVTSPNAAPPAADSPVPQRNSY 111
             .::|||..|:.|...|.. ||........:|..|:.....|
 Worm   310 GGRNRKVCEAFVKTGKSMA-EVEKELLNGQSAQGPLTAEEVY 350

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG43342NP_001247238.1 BESS 109..143 CDD:281011 1/4 (25%)
gpdh-2NP_871632.1 glycerol3P_DH 37..385 CDD:274551 25/108 (23%)
NAD_Gly3P_dh_N 37..217 CDD:279543
NAD_Gly3P_dh_C 240..378 CDD:284817 25/108 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 0 Normalized mean entropy S475
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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