DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43336 and Elane

DIOPT Version :10

Sequence 1:NP_001247122.1 Gene:CG43336 / 12798414 FlyBaseID:FBgn0263041 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_001100237.1 Gene:Elane / 299606 RGDID:1307968 Length:271 Species:Rattus norvegicus


Alignment Length:286 Identity:71/286 - (24%)
Similarity:103/286 - (36%) Gaps:78/286 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 HSPSVPRVKNGTVASLTSS-----------------------PWMAFLHSTDGRFICGGSLITNR 72
            |.||     |.|:||:..:                       |:|..|....|.| ||.:||...
  Rat     8 HRPS-----NQTLASMLLALLLVCPALASEIVGGRPAQPHAWPFMVSLQRRGGHF-CGATLIARN 66

  Fly    73 LVLTAAHCFLDRT--ELVARLGEYDREEYEMCHDSYCTYRIEAMVERGFRHRHYNPMTMAYDIAI 135
            .|::||||...|.  .:...||.:|....|.....:...||   .|.||     :|..:..||.|
  Rat    67 FVMSAAHCVNGRNFQSVQVVLGAHDLRRREPTRQIFSVQRI---FENGF-----DPSRLLNDIVI 123

  Fly   136 LRLYRKVQYTDNIRPICIVIDPRWRKYIDSLDPLTGTGWGKTESEGDSAKLRTV----------D 190
            ::|........|::   :...|...:.:.:..|....|||:.   |.:..|.:|          :
  Rat   124 IQLNGSATINANVQ---VAELPAQGQGVGNRTPCVAMGWGRL---GTNRPLPSVLQELNVTVVTN 182

  Fly   191 LARKHPEVCRRYATLSLTANQFCAGNERSNLCNGDSGGPVGALIPYGKSKRFVQVGIASFTNTQC 255
            |.|:...||    ||        ....::.:|.||||||:       .....|| ||.||....|
  Rat   183 LCRRRVNVC----TL--------VPRRQAGICFGDSGGPL-------VCNNLVQ-GIDSFIRGGC 227

  Fly   256 ---VMVSVFTDVMSYVDWILAVHNYH 278
               .....|..|..:.|||.::...|
  Rat   228 GSGFYPDAFAPVAEFADWINSIIRSH 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43336NP_001247122.1 Tryp_SPc 37..271 CDD:214473 65/271 (24%)
ElaneNP_001100237.1 Tryp_SPc 33..249 CDD:238113 63/250 (25%)

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