DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43336 and Gzma

DIOPT Version :10

Sequence 1:NP_001247122.1 Gene:CG43336 / 12798414 FlyBaseID:FBgn0263041 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_703198.2 Gene:Gzma / 266708 RGDID:628640 Length:261 Species:Rattus norvegicus


Alignment Length:210 Identity:58/210 - (27%)
Similarity:91/210 - (43%) Gaps:38/210 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 RVKNGTVASLTSSPWMAFLH-STDGRFICGGSLITNRLVLTAAHCFL-DRTELVARLGEYDREEY 99
            |:..|......|.|:|..|. ..|.  :|.|:||....|||||||.. .::|::.......:|..
  Rat    28 RIIGGDTVVPHSRPYMVLLKLKPDS--VCAGALIAKNWVLTAAHCIPGKKSEVILGAHSIKKEPE 90

  Fly   100 EMCHDSYCTYRIEAMVERGFRHRHYNPMTMAYDIAILRLYRKVQYTDNIRPICIVIDPRWRKYID 164
            :..          ..|::.:.:..::..|...|:.:|||.:|.....|   :.|:..|   |..|
  Rat    91 QQI----------LSVKKAYPYPCFDKHTHEGDLQLLRLKKKATLNKN---VAILHLP---KKGD 139

  Fly   165 SLDPLTGT-----GWGKTESEG-DSAKLRTVDLARKHPEVC---RRY---ATLSLTANQFCAGNE 217
            .:.|  ||     |||:..::. .|..||.|::.....::|   :.|   ..:.|  |..||||.
  Rat   140 DVKP--GTRCHVAGWGRFHNKSPPSDTLREVNITVIDRKICNDEKHYNFNPVIGL--NMICAGNL 200

  Fly   218 R--SNLCNGDSGGPV 230
            |  .:.|.||||||:
  Rat   201 RGGKDSCYGDSGGPL 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43336NP_001247122.1 Tryp_SPc 37..271 CDD:214473 58/210 (28%)
GzmaNP_703198.2 Tryp_SPc 29..256 CDD:238113 57/209 (27%)

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