DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43336 and Gzmb

DIOPT Version :10

Sequence 1:NP_001247122.1 Gene:CG43336 / 12798414 FlyBaseID:FBgn0263041 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_612526.2 Gene:Gzmb / 171528 RGDID:620018 Length:248 Species:Rattus norvegicus


Alignment Length:278 Identity:75/278 - (26%)
Similarity:117/278 - (42%) Gaps:44/278 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNVVVVGLTFFLLPLLGSTQFLDMACGIRAHSPSVPRVKNGTVASLTSSPWMAFLHSTD---GRF 62
            |.::::.|:|.|.|...:.:.:                 .|..|...|.|:||:|...|   |..
  Rat     1 MKLLLLLLSFSLAPKTEAGEII-----------------GGHEAKPHSRPYMAYLQIMDEYSGSK 48

  Fly    63 ICGGSLITNRLVLTAAHCFLDRTELVARLGEYDREEYEMCHDSYCTYRIEAMVERGFRHRHYNPM 127
            .|||.||....|||||||  ..:::...||.::.:|.|.........:|       ..|..||..
  Rat    49 KCGGFLIREDFVLTAAHC--SGSKINVTLGAHNIKEQEKMQQIIPVVKI-------IPHPAYNSK 104

  Fly   128 TMAYDIAILRLYRKVQYTDNIRPICIVIDPRWRKYIDSLDPLTGTGWGKTESEGD-SAKLRTVDL 191
            |::.||.:|:|..|.:.:..::|:.:   ||....:...|.....||||....|. |..|:.|:|
  Rat   105 TISNDIMLLKLKSKAKRSSAVKPLNL---PRRNVKVKPGDVCYVAGWGKLGPMGKYSDTLQEVEL 166

  Fly   192 ARKHPEVCRRYATLSL-TANQFCAGNERSNLCN--GDSGGPVGALIPYGKSKRFVQVGIASFTNT 253
            ..:..:.|..|..... .||:.|||:.:....:  ||||||:..        :.|..||.|:...
  Rat   167 TVQEDQKCESYLKNYFDKANEICAGDPKIKRASFRGDSGGPLVC--------KKVAAGIVSYGQN 223

  Fly   254 QCVMVSVFTDVMSYVDWI 271
            .......||.|.:::.||
  Rat   224 DGSTPRAFTKVSTFLSWI 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43336NP_001247122.1 Tryp_SPc 37..271 CDD:214473 68/240 (28%)
GzmbNP_612526.2 Tryp_SPc 21..244 CDD:238113 70/258 (27%)

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