Protein Alignment HP1Lcsd and Cbx3

DIOPT Version :9

• Sequence 1: NP_001246478.1
• Gene: HP1Lcsd / 12798145
• FlyBaseID: FBgn0263084
• Length: 83
• Species: Drosophila melanogaster
• Sequence 2: NP_001008314.2
• Gene: Cbx3 / 297093
• RGDID: 1549705
• Length: 183
• Species: Rattus norvegicus
• Alignment Length: 68
• Identity: 27/68 - (39%)
• Similarity: 40/68 - (58%)
• Gaps: 4/68 - (5%)

  Fly     6 FVRGRMVEKIVYVFTTANKNTMFLIKFKDSPVVEVVPGIEANRRIPQMVIEFYMDHL---SLPPP 67
            |.||...|:|:.. |.::...|||:|:|||...::|...|||.:.||:||.||.:.|   |.|..
  Rat   117 FARGLDPERIIGA-TDSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVIAFYEERLTWHSCPED 180

  Fly    68 ESR 70
            |::
  Rat   181 EAQ 183

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HP1Lcsd	NP_001246478.1	Chromo_shadow	12..63	CDD:279701	21/53 (40%)
Cbx3	NP_001008314.2	CD_HP1gamma_Cbx3	29..78	CDD:349299
		CSD_HP1gamma_Cbx3	116..173	CDD:349303	23/56 (41%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000191
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910