DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Chil3 and Mur89F

Sequence 1:NP_034022.2 Gene:Chil3 MGIID:1330860 Length:398 Species:Mus musculus
Sequence 2:NP_001262662.1 Gene:Mur89F FlyBaseID:FBgn0038492 Length:2159 Species:Drosophila melanogaster

Alignment Length:70 Identity:20/71 (28%)
Similarity:30/71 (42%) Gaps:18/71 (25%)


Mouse   229 YKSPYDIGKSADLNVDSIISYWKDH-----GAASEKLIV----GFPAYGHTFILSDPSKTGIGAP 284
            ::.|.:.| .|.||..|:||:....     |:|.|..|:    ||        ::|||...:...
  Fly   161 HRLPTNYG-LAGLNGVSVISFSSSSSLRAVGSAEEDGIICRDDGF--------MTDPSDCTVFYR 216

Mouse   285 TISTG 289
            .||.|
  Fly   217 CISNG 221

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Chil3NP_034022.2 GH18_chitolectin_chitotriosidase 24..387 CDD:119351 20/71 (28%)
Glyco_18 26..365 CDD:214753 20/71 (28%)
Mur89FNP_001262662.1 CBM_14 57..106 CDD:279884
CBM_14 200..250 CDD:279884 8/31 (26%)
CBM_14 484..536 CDD:279884
CBM_14 745..798 CDD:279884
CBM_14 1025..1074 CDD:279884
CBM_14 1206..1261 CDD:279884
CBM_14 1336..1388 CDD:279884
CBM_14 1523..1577 CDD:279884
VAD1-2 <1599..>1656 CDD:291956
CBM_14 1809..1861 CDD:279884
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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