DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CNGA1 and CG42260

DIOPT Version :9

Sequence 1:XP_005248106.2 Gene:CNGA1 / 1259 HGNCID:2148 Length:765 Species:Homo sapiens
Sequence 2:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster


Alignment Length:558 Identity:233/558 - (41%)
Similarity:335/558 - (60%) Gaps:55/558 - (9%)


- Green bases have known domain annotations that are detailed below.


Human   123 SASTSEESENENPHARGSFSYKSLRKGGPS---------QREQYLPGAIALFNVNNSSNKDQEPE 178
            ||||    .:.:|||.|..|     :|||.         ....:..||.:.......|:..|...
  Fly   494 SAST----VSHHPHAHGPPS-----QGGPGGPGPPHGGHPHHPHHGGAGSGGGSGPGSHGGQPHH 549

Human   179 EKKKKKKEKKSKSDDKNENKNDPEKKKKKKDKEKKKKEEKSKDKKEEEKKEVVVIDPSGNTYYNW 243
            :|.::...::.::                               ....:|...|.||:|...|.|
  Fly   550 QKPRRTASQRIRA-------------------------------ATAARKLHFVFDPAGRLCYYW 583

Human   244 LFCITLPVMYNWTMVIARACFDELQSDYLEYWLILDYVSDIVYLIDMFVRTRTGYLEQGLLVKEE 308
            ...:::..:||:.::|.|..|.|:....:..|..|||:||.:||||:....||||||.|:|..:.
  Fly   584 SMVVSMAFLYNFWVIIYRFAFQEINRRTIAIWFCLDYLSDFLYLIDILFHFRTGYLEDGVLQTDA 648

Human   309 LKLINKYKSNLQFKLDVLSLIPTDLLYFKLGWNYPEIRLNRLLRFSRMFEFFQRTETRTNYPNIF 373
            |||...|.::..|.:|.|.|:|.|.||..:|:| ..:|..||::..|.:.|..|||..|||||:|
  Fly   649 LKLRTHYMNSTIFYIDCLCLLPLDFLYLSIGFN-SILRSFRLVKIYRFWAFMDRTERHTNYPNLF 712

Human   374 RISNLVMYIVIIIHWNACVFYSISKAIGFGNDTWVYPDINDPEFGRLARKYVYSLYWSTLTLTTI 438
            |.:.|:.|:::|.|||.|:::.|.|..|||:..|||   :|.|...:.::|:.|.||.||.||||
  Fly   713 RSTALIHYLLVIFHWNGCLYHIIHKNNGFGSRNWVY---HDSESADVVKQYLQSYYWCTLALTTI 774

Human   439 GETPPPVRDSEYVFVVVDFLIGVLIFATIVGNIGSMISNMNAARAEFQARIDAIKQYMHFRNVSK 503
            |:.|.|....|||||::..|.|:::|||::|::.:::::::|||.||||::|.:|.||..|.|..
  Fly   775 GDLPKPRSKGEYVFVILQLLFGLMLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPN 839

Human   504 DMEKRVIKWFDYLWTNKKTVDEKEVLKYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVL 568
            .::.:|||||||||..:|..||:..:..|||||:|||||||||||||:|.||.:.|||.|.||||
  Fly   840 HLQVKVIKWFDYLWLTQKCSDEERAVSCLPDKLKAEIAINVHLDTLKRVEIFQNTEAGFLCELVL 904

Human   569 KLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGVTQFVVLSDGSYFGEISILNIKGSKAG 633
            :|:|.::|||||||:||::|:||||:..|:|.||||:|.|....|..|||||||||||:  ..||
  Fly   905 RLRPVLFSPGDYICRKGEVGKEMYIVNRGRLQVVADNGKTVMASLKAGSYFGEISILNM--GTAG 967

Human   634 NRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKTMLE 671
            |||||:::|:||||||.|||.|:.:.|.|||.|:..||
  Fly   968 NRRTASVRSVGYSDLFVLSKKDMWDVLKEYPAARVRLE 1005

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNGA1XP_005248106.2 None
CG42260NP_001356969.1 Ion_trans 581..819 CDD:334124 98/241 (41%)
CAP_ED 890..1004 CDD:237999 69/115 (60%)
DUF4655 1084..>1154 CDD:317882
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 124 1.000 Domainoid score I5527
eggNOG 1 0.900 - - E1_KOG0500
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 1 1.000 - - FOG0000167
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100817
Panther 1 1.100 - - O PTHR45638
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
76.820

Return to query results.
Submit another query.