DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Camk2a and grp

DIOPT Version :9

Sequence 1:XP_006525604.1 Gene:Camk2a / 12322 MGIID:88256 Length:489 Species:Mus musculus
Sequence 2:NP_477011.1 Gene:grp / 34993 FlyBaseID:FBgn0261278 Length:512 Species:Drosophila melanogaster


Alignment Length:460 Identity:119/460 - (25%)
Similarity:194/460 - (42%) Gaps:87/460 - (18%)


- Green bases have known domain annotations that are detailed below.


Mouse     2 ATIT-------CTR-FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDH---- 54
            ||:|       .|| |.|.:.|.:.||:||:..|:..:....|:..|.|:::.||     |    
  Fly     3 ATLTEAGTGPAATREFVEGWTLAQTLGEGAYGEVKLLINRQTGEAVAMKMVDLKK-----HPDAA 62

Mouse    55 QKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQI 119
            ..:.:|..|.::|:..:|:|.....|:....|:..:...|||||:.|.......:.:|.....|:
  Fly    63 NSVRKEVCIQKMLQDKHILRFFGKRSQGSVEYIFLEYAAGGELFDRIEPDVGMPQHEAQRYFTQL 127

Mouse   120 LEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGYLSP 182
            |..:.:.||.|:.|||||||||||.   :...||::|||:|  ...:|:::......||..|::|
  Fly   128 LSGLNYLHQRGIAHRDLKPENLLLD---EHDNVKISDFGMATMFRCKGKERLLDKRCGTLPYVAP 189

Mouse   183 EVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF----PSPEWDTVTPE 243
            |||:|..:.:|.|||:|||||..:|.|..| ||        |......:|    .:..|...||.
  Fly   190 EVLQKAYHAQPADLWSCGVILVTMLAGELP-WD--------QPSTNCTEFTNWRDNDHWQLQTPW 245

Mouse   244 AK------DLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVD-------CLKKFNA 295
            :|      .|:.|:|..:|..|:|..:.|.|.|.:.:  .|......:.||       |..|...
  Fly   246 SKLDTLAISLLRKLLATSPGTRLTLEKTLDHKWCNMQ--FADNERSYDLVDSAAALEICSPKAKR 308

Mouse   296 RRKLKGAILTTMLATRNFSGGKSGGNKKNDGVKKRKSSSSVQLMESSESTNTTIEDEDTKVRKQE 360
            :|....|.|:               |..:|.:.:...|..:..|.|.:..|..:....:|.    
  Fly   309 QRLQSSAHLS---------------NGLDDSISRNYCSQPMPTMRSDDDFNVRLGSGRSKE---- 354

Mouse   361 IIKVTEQLIEAISNGDFESYTKMCDPGMTAFEPEALGNLVEGLDFHRF------YFENLWSRNSK 419
                        ..||.::..:......:..:|..|.:|:.....::.      ||:.|..|.::
  Fly   355 ------------DGGDRQTLAQEARLSYSFSQPALLDDLLLATQMNQTQNASQNYFQRLVRRMTR 407

Mouse   420 PVHTT 424
            ...||
  Fly   408 FFVTT 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Camk2aXP_006525604.1 STKc_CaMKII 11..302 CDD:270988 93/313 (30%)
CaMKII_AD 357..484 CDD:285524 11/74 (15%)
grpNP_477011.1 STKc_Chk1 20..279 CDD:270971 86/275 (31%)
S_TKc 22..278 CDD:214567 85/272 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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