DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ranbp16 and AT5G06120

DIOPT Version :10

Sequence 1:NP_001188596.1 Gene:Ranbp16 / 118436 FlyBaseID:FBgn0053180 Length:1110 Species:Drosophila melanogaster
Sequence 2:NP_196230.2 Gene:AT5G06120 / 830499 AraportID:AT5G06120 Length:1066 Species:Arabidopsis thaliana


Alignment Length:1089 Identity:415/1089 - (38%)
Similarity:647/1089 - (59%) Gaps:63/1089 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IQQLEVLCKQLYEATDIRIRSEAEKALVTFVSSQDALPKCQLLLQRADSSYAQLLAASTLTKLI- 66
            :.|||.:|::||.:.|...|:.||.:|..|..:.|.:.:||.:|..:...|:.:||:|:|.|.: 
plant    12 LAQLEAMCERLYNSQDSAERAHAENSLRCFSVNTDYISQCQYILDNSSKPYSLMLASSSLLKQVT 76

  Fly    67 -QGLSLQERIDIRSYALNYLAT-VPNLQHFVVQALVSLLAKLTKYGWFDSYKEEMVFQNLLEDVK 129
             ..|.|..|:|||:|.:||||| .|.:|.||:.:|:.||.:|||:||.|..:    |::::::..
plant    77 DHTLPLNLRLDIRAYIVNYLATRGPKMQSFVIASLIQLLCRLTKFGWLDDDR----FRDVVKEST 137

  Fly   130 KFL-QGSVEHCTIGVQILSQLVCEMNSVVEMDVQVSFSKMRKIATSFRDQQLLETFLLSCSLLVS 193
            .|| |||.:|..||::||.|||.|||   :.:..:..:..|::|.:||||.|.:.|.::.:.|..
plant   138 NFLEQGSSDHYAIGLRILDQLVQEMN---QPNPGLPSTHHRRVACNFRDQSLFQVFRIALTSLSY 199

  Fly   194 ARDNSKNISFMDESQQALISHVLRLTKNCLSFDFIGSSTDESADDMNNVQIPTAWRPAFLDSNTL 258
            .::::..     ..|:..:|..||    |:||||:|:|.|||.::...|||||:||....||:||
plant   200 LKNDAAG-----RLQELALSLALR----CVSFDFVGTSIDESTEEFGTVQIPTSWRSVLEDSSTL 255

  Fly   259 KLFFDLYQILPNGLASYSISCLVQITSVRRSLF-NNSERTKFLTHLVEGVKDILTTLHGLSDPDN 322
            ::|||.|....:.|:..::.|||::.||||||| |::.|:.||.||:.|.|:||.|..||:|.||
plant   256 QIFFDYYGSTESPLSKEALECLVRLASVRRSLFTNDATRSNFLAHLMTGTKEILQTGKGLADHDN 320

  Fly   323 YHEFCRLLARLKSNYQLGELIAVPCYPEAIQLIAKFTVESLHLWLFAPNSVHYLLTLWQRMVASV 387
            ||.|||||.|.:.||||.||:.:..|.|.|||:|:||::||..|.:|.:||:|||.:|.|:||||
plant   321 YHVFCRLLGRFRLNYQLSELVKMEGYGEWIQLVAEFTLKSLQSWQWASSSVYYLLGMWSRLVASV 385

  Fly   388 PYVKSPDPHLLGTYTPEVIKAYIESRLDAVPVIIRDN-LDDPLDDFCMVQQQLEQLSVIERCEYN 451
            ||:|...|.||..:.|::.:.:|.||.::|...:.|: .|.|||...::|.:|:....:.|.:|.
plant   386 PYLKGDSPSLLDEFVPKITEGFIISRFNSVQASVPDDPTDHPLDKVEVLQDELDCFPYLCRFQYE 450

  Fly   452 KTCNLLVQHFDQKAREYENLLQTPNANSIDITIHELQLTWLVYIIGSAI-VGRLTVATSDEHDTM 515
            :|...::...:...:.|....|...|::.::.:.|.:|:|:|:|:.:.: :.:.:..:.:..:.:
plant   451 RTGMYIINTMEPLLQSYTERGQLQFADNSELALIEAKLSWIVHIVAAIVKIKQCSGCSVETQEVL 515

  Fly   516 DAELVIRVLQLMTLTDA-----RLPQAGCEKLELAILSFLDQVRKMHSSEQA-QKANLNKRLSEV 574
            ||||..|||:|:.:.|:     |..:...::|:.|||:|....||.:..:|| ..:.|..||.|:
plant   516 DAELSARVLRLVNVMDSGLHRQRYGEISKQRLDRAILTFFQNFRKSYVGDQAMHSSKLYARLKEL 580

  Fly   575 FGLTDEQMLLSFINRKIITNLKFWGRSESIITKTLMLLSELSVHFNSVRKLARLEEVQFMLTHHT 639
            .||.|..:||:.|..||.||||.:..||.:|..||.|..||:..:.:.:.|.:|:.|.|::::||
plant   581 LGLHDHLVLLNVIVGKIATNLKCYTESEEVINHTLSLFLELASGYMTGKLLLKLDTVTFIISNHT 645

  Fly   640 SEHFPFLGTNSSLSEMRC---RTMFYTSLGRLLMFDLGEDEERFYNFLEPLTNQFESLGSVMMDN 701
            .|.|||      |.|.||   ||.||.::|.|:..:  :...:|...:|||...|.:|.|.  .:
plant   646 REQFPF------LEEYRCSRSRTTFYYTIGWLIFME--DSLIKFKTSMEPLLQVFRTLEST--PD 700

  Fly   702 NIFSNEEAKKVIIGLARDLRGLALPLNARIQYTMLFEWLYYADYLPILLRAMDLWAHDPAVTTPI 766
            ::|..:..|..:|||.|||||:|:..::|..|..||:|||.| ::|:|||.:..|...|.||||:
plant   701 SMFRTDAVKFALIGLMRDLRGIAMATSSRRSYGFLFDWLYPA-HMPLLLRGVSHWFDTPEVTTPL 764

  Fly   767 LKLFAELVHCRTQRLAGNVSSPMGILLFREASKLICIYGNRILHQEVPR-ERLYPMRLKGIAICF 830
            ||..||.||.:||||..:.|||.|||||||.||||..||:|||  .:|. ..:|..:.|||.:..
plant   765 LKFMAEFVHNKTQRLTFDSSSPNGILLFREVSKLIVAYGSRIL--ALPNVADIYAFKYKGIWVSL 827

  Fly   831 LILKNSLGGNYVNCGVFKLYGDDTLDSVLNIIAKLILTIEQRDLIEYPKLSTAYYNLLNCLSQDH 895
            .||..:|.|||.|.|||:||||..|...|:|..|:.|.|...|::.|.||:.||:..:..|...|
plant   828 TILSRALSGNYCNFGVFELYGDRALADALDIALKMTLAIPLADILAYRKLTKAYFGFVEVLCASH 892

  Fly   896 VSYLAALEPAAFVYILKSLTKGLAALDSATYISCCTILDSIVSYIFKQLQM-KVSTFPNKKLRSL 959
            ::::..|:.|.|::::.||..||..||::....|...:|::.||.|..:.| :..|.|       
plant   893 ITFILKLDTATFMHLVGSLESGLKGLDTSISSQCAIAVDNLASYYFNNITMGEAPTTP------- 950

  Fly   960 NQENVQFLKVVEMNSELLQSMMSSLLNNVLQEDCRNQWSMSRPLLVLILLYEDYYRSLKDRIICA 1024
              ..::|.:.:.....|...::.:|...||.|||.||||:|||:|.|||:.|..:..||.:|:.:
plant   951 --AAIRFAQHIADCPSLFPEILKTLFEIVLFEDCGNQWSLSRPMLSLILISEQIFSDLKAKILSS 1013

  Fly  1025 -------QPIEKQQTMAQWFDDLMVGIERNVSSKNKEKFTQNMSTFRRD 1066
                   ||.::.|.::..||.||..|.|.:.|||::|||||::.||.:
plant  1014 QSIILMVQPADQHQRLSACFDSLMTDISRGLDSKNRDKFTQNLTLFRHE 1062

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ranbp16NP_001188596.1 IBN_N 25..87 CDD:197981 24/63 (38%)
AT5G06120NP_196230.2 IBN_N 34..98 CDD:197981 24/63 (38%)

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