DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr64b and lite-1

DIOPT Version :10

Sequence 1:NP_728921.1 Gene:Gr64b / 117480 FlyBaseID:FBgn0045478 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_509043.3 Gene:lite-1 / 180894 WormBaseID:WBGene00001803 Length:439 Species:Caenorhabditis elegans


Alignment Length:366 Identity:72/366 - (19%)
Similarity:133/366 - (36%) Gaps:148/366 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 LSEFGAVINYVIKVTINFHTSSTLSLYIVCLL---EHLFFWRLAIQWPRIMRTWHGVEQLFLRVP 118
            :|::|.:: |::. |.|..|.:     |.|:|   ..||..|.||....|:              
 Worm   188 MSKWGYIL-YIVG-TPNLDTET-----IFCVLLDSYALFVSRAAISALAIL-------------- 231

  Fly   119 YRFYGEYRIKRRIYIVFTIVMSSALVEHCLLLGNSF-HLSN----MERTQCKINVTYFESIY--- 175
              ||                      :||.::..|. ||.|    .|:.:|.:..:..:.|:   
 Worm   232 --FY----------------------QHCSVIRRSIKHLINEMVPAEQDECPLPESSLQKIHDCQ 272

  Fly   176 -KWER---------PHLYMILPYHFWM-LPILEWVNQTIAYPRSFTDCFIMCIGIGLAARFHQLY 229
             .::|         .:...:|.|.:.: :||.               ||:|.:|:.         
 Worm   273 ISYQRIFNGKAVIEEYYSFVLFYSYGVCIPIF---------------CFLMFVGMS--------- 313

  Fly   230 RRIAAVHRKVMPAVFWTEVREHYLALKRLVHLLDAAIAPLVLLAFGNNMSFICFQLFNSFKNIGV 294
                      ..::.|:||      :..::.:::|.   ||||.|    |...|.:     |...
 Worm   314 ----------AQSICWSEV------VSIVIWIVNAI---LVLLLF----SLPAFMI-----NEDG 350

  Fly   295 DFLVMLAF-WYSLGFAVVRTLLTIFVASSINDYERKIVTALRDVPSRAWSIEVQRFSEQLGNDTT 358
            |.||..:| .|...|                 :|.:.:|.|.         ::..|:.|:.:...
 Worm   351 DRLVASSFRMYHETF-----------------HEERDLTVLS---------QMTFFTFQIHSTKL 389

  Fly   359 ALSGSGFFYLTRSLVLAMGTTIITYELMI--SDVINQGSIR 397
            .||...:||:.||::|::.:.|:||.|::  .|:.|..|::
 Worm   390 TLSACNYFYMDRSILLSLFSAILTYFLILWEFDIKNNQSLQ 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr64bNP_728921.1 Trehalose_recp 3..400 CDD:336318 72/366 (20%)
lite-1NP_509043.3 7tm_7 75..425 CDD:462463 70/359 (19%)

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