DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CFTR and l(2)03659

DIOPT Version :10

Sequence 1:NP_000483.3 Gene:CFTR / 1080 HGNCID:1884 Length:1480 Species:Homo sapiens
Sequence 2:NP_610482.3 Gene:l(2)03659 / 47905 FlyBaseID:FBgn0010549 Length:1374 Species:Drosophila melanogaster


Alignment Length:1497 Identity:407/1497 - (27%)
Similarity:719/1497 - (48%) Gaps:276/1497 - (18%)


- Green bases have known domain annotations that are detailed below.


Human     1 MQRSPLEKASVVSKLFFSWTRPILRKGYRQRLELSDIYQIPSVDSADNLSEKLEREWDRELASK- 64
            :..:|..:::.:|.|.|.:|.||.|||||:.|:.:|:|:......:|.|..:|...|:|||.:. 
  Fly    86 LPENPRARSNFISSLCFWYTIPIFRKGYRKTLDSTDLYRPLEEQKSDILGNRLCASWERELKNDG 150

Human    65 KNPKLINALRRCFFWRFMFYGIFLYLGEV-TKAVQPLLLGRIIASYDPDNKEERSIAIYLGIGLC 128
            ::|.|:.||.|.|.|:..|.|:.:::.|: .:.:||:.|.::| ||.....:..:...|..:...
  Fly   151 RSPSLVRALLRVFGWQLGFPGLAIFVVELGLRTLQPIFLVKLI-SYFSGEPDAANAGFYYAVAQI 214

Human   129 LLFIVRTLLLHPAIFGLHHIGMQMRIAMFSLIYKKTLKLSSRVLDKISIGQLVSLLSNNLNKFDE 193
            ::..:..::|.|..||:||:..:||:||.|:|::|.|:|:...|...:.|.:|:|:||::.:.|.
  Fly   215 VISALTVMILTPTTFGIHHVCFKMRVAMGSMIFRKALRLTKGALGDTTSGHVVNLISNDIPRLDS 279

Human   194 GLALAHFVWIAPLQVALLMGLIWELLQASAFCGLGFLIVLALFQAGLGRMMMKYRDQRAGKISER 258
            .....|::|:.||||.::..|:::.:..||..|:.|:::....|..||......:.:.|.:...|
  Fly   280 APYTVHYLWVGPLQVLVITYLMYQEIGISAVFGVLFMLLFMPIQMYLGTRTSAIQLKAAERTDNR 344

Human   259 LVITSEMIENIQSVKAYCWEEAMEKMIENLRQTELKLTRKAAYVRYFNSSAFFFSGFFVVFLSVL 323
            :.:.:|:|..||.:|.|.||:..|:|:.:.|:.|:...|:..|:|.|:.:.........:|||::
  Fly   345 IRMVNEIISAIQVLKMYAWEQPFEQMVTHAREKEMNTIRQGQYIRGFDFARRIVLSRVAIFLSLV 409

Human   324 PYALIKGIILRKIFT-TISFCI-----VLRMAVTRQFPWAVQTWYDSLGAINKIQDFLQKQEYKT 382
            .|     :||.|:|| .|:|.|     ||..|::...|.|:......|.:|.:::.|:|.:|.  
  Fly   410 GY-----VILGKVFTPEIAFMITAYYNVLLAAMSIYVPSAIIQTAQFLTSIRRVEQFMQSEEL-- 467

Human   383 LEYNLTTTEVVMENVTAFWEEGFGELFEKAKQNN--NNRKTSNGDDSLFFSNFSLL--------G 437
                                 |..:..|...::.  .|..::|.:..|..|..|:.        .
  Fly   468 ---------------------GSSDKSEGPSKDTVPGNPPSNNNEADLLKSAISIRDLKAKWDPN 511

Human   438 TP--VLKDINFKIERGQLLAVAGSTGAGKTSLLMVIMGELEPSEGKIKHSGRISFCSQFSWIMPG 500
            :|  .|..||.:|:.|.::||.|.||:||:||:..|:|||:.:.|:::.:|.:|:.||.||:..|
  Fly   512 SPDYTLSGINLEIKPGSVVAVIGLTGSGKSSLIQAILGELKANSGQLQVNGSLSYTSQESWLFSG 576

Human   501 TIKENIIFGVSYDEYRYRSVIKACQLEEDISKFAEKDNIVLGEGGITLSGGQRARISLARAVYKD 565
            |:::||:||...|..||..|:|.|.||.|......:||.::||.|.||||||:|||||||:||:.
  Fly   577 TVRQNILFGQPMDSQRYEEVVKKCALERDFDLLPLRDNTIVGERGATLSGGQKARISLARSVYRK 641

Human   566 ADLYLLDSPFGYLDVLTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTF 630
            |.:||||.|...:|....:.:|:.||...:...|.:|||.:.:.|...|:|:||..|        
  Fly   642 ASIYLLDDPLSAVDASVARHLFDQCVRGHLRGSTVVLVTHQEQFLPHVDQIVILANG-------- 698

Human   631 SELQNLQPDFSSKLMGCDSFDQFSAERRNSILTETLHRFSLEGDAPVSWTETKKQSFKQTGEFGE 695
                                                                   ..|..|::..
  Fly   699 -------------------------------------------------------QIKALGDYES 708

Human   696 KRKNSILNPINSIR---KFSIVQKTPLQMNGIEEDSDEPLERRLSLVPDSEQGEAILPRISVIST 757
            ..|..::..:.|:.   |....::.||.:|..:..::        :.|..|..|   ..:...|:
  Fly   709 LLKTGLITGLGSLSKTDKAKTEEQEPLNLNSPDNKNE--------VTPIKENSE---QTVGGSSS 762

Human   758 GPTLQARRRQSVLNLMTHSVNQGQNIHRKTTASTRKVSLAPQANLTELDIYSRRLSQETGLEISE 822
            |.                     :::.|:.:..   :|||                         
  Fly   763 GK---------------------EHVERQESGG---ISLA------------------------- 778

Human   823 EINEEDLKECFFDDMESIPAVTTWNTYLRYITVHKSLIFVLIWCLVIFLAEVAAS----LVVLWL 883
                                     .|.:|......|:..|:......||:||.:    .:..|:
  Fly   779 -------------------------LYRKYFQAGGGLVAFLVMLSSSVLAQVAVTGGDYFLTYWV 818

Human   884 LGNTPLQDKGNSTHSRNNS-----------YAVIITSTSSYYVFYIYVGVADTLLAMGFFRGLPL 937
            ...:.....|......:.|           .:||:..:||:.:|.|                   
  Fly   819 KKESTAAGHGEMEDMESKSMDVYKYTLIIILSVIMNLSSSFLLFNI------------------- 864

Human   938 VHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVI 1002
               ....|..||:.:.:.|.:|.|...:..|.|.|||||:||::.:|::||:.:.|.:|:.|.:.
  Fly   865 ---AKKASIRLHNTIFNRVTRADMHFFSINKHGSILNRFTKDMSQVDEVLPVVLVDVMQIALWLA 926

Human  1003 GAIAVVAVLQPYIFVATVPVIVAFIMLRAYFLQTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRA 1067
            |.|.|:|.:.|.:.|.|:.:.|.|..||..:|:||:.||::|:..|||:::||..||.||.|:||
  Fly   927 GIIIVIANVNPLLLVPTLMLSVIFYHLRNLYLKTSRDLKRVEAINRSPVYSHLAASLNGLTTIRA 991

Human  1068 FGRQPYFETLFHKALNLHTANWFLYLSTLRWFQMRIEMIFVIFFIAVTFISILTTGEGEGR-VGI 1131
            ...|...|..|....:.|::.:|:|:||.:.|...:..|.|| :|::..:|......|.|. ||:
  Fly   992 LDAQRVLEKEFDSYQDAHSSAFFMYISTSQAFGYCMNCICVI-YISIITLSFFAFPPGNGADVGL 1055

Human  1132 ILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKF--------IDMPTEGKPTKSTKPYKNGQLS 1188
            ::|.||.::..:||.|..:.::::.|.:|.||.::        ::.|.:.||.|:          
  Fly  1056 VITQAMGLIDMVQWGVRQTAELENTMTAVERVVEYESIEPEGMLEAPDDKKPPKT---------- 1110

Human  1189 KVMIIENSHVKKDDIWPSGGQMTVKDLTAKYTEGGNA--ILENISFSISPGQRVGLLGRTGSGKS 1251
                           ||..|::..|:|..:||....|  :|:::||.|.|.::||::||||:|||
  Fly  1111 ---------------WPEQGEIIFKELNLRYTPNAKAENVLKSLSFVIQPREKVGIVGRTGAGKS 1160

Human  1252 TLLSAFLRLLNTEGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIW 1316
            :|::|..||..|:|.:.||......:.|...|:...:|||:..:||||.|.||||::::||:::|
  Fly  1161 SLINALFRLSYTDGSVLIDTRDTRQMGLHDLRRQISIIPQEPVLFSGTMRYNLDPFDEYSDEKLW 1225

Human  1317 KVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTY 1381
            ...:||.|:.|:...|..|...:.:||...|.|.:||:||||::|.:.:||::||.:|::||.|.
  Fly  1226 GCLEEVKLKEVVSDLPDGLASKISEGGTNFSVGQRQLVCLARAILRENRILVMDEATANVDPQTD 1290

Human  1382 QIIRRTLKQAFADCTVILCEHRIEAMLECQQFLVIEENKVRQYDSIQKLL--NERSLFRQAISPS 1444
            .:|:.|::..|.||||:...||:..:::..:.:|::..:|.::.|..:|:  ::..:|...::.|
  Fly  1291 GLIQATIRSKFRDCTVLTIAHRLHTIIDSDKVMVMDAGRVVEFGSPYELMTKSDSKVFHNLVNQS 1355

Human  1445 DR 1446
            .|
  Fly  1356 GR 1357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CFTRNP_000483.3 CFTR_protein 1..1480 CDD:273530 407/1497 (27%)
Disordered R region. /evidence=ECO:0000269|PubMed:10792060 654..831 17/179 (9%)
Interaction with GORASP2. /evidence=ECO:0000269|PubMed:21884936 1386..1480 15/63 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1452..1480
PDZ-binding. /evidence=ECO:0000269|PubMed:11707463, ECO:0000269|PubMed:16331976 1478..1480
l(2)03659NP_610482.3 PLN03130 83..1369 CDD:215595 407/1497 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.