DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CFTR and CG11898

DIOPT Version :10

Sequence 1:NP_000483.3 Gene:CFTR / 1080 HGNCID:1884 Length:1480 Species:Homo sapiens
Sequence 2:NP_651679.2 Gene:CG11898 / 43451 FlyBaseID:FBgn0039645 Length:1320 Species:Drosophila melanogaster


Alignment Length:1521 Identity:394/1521 - (25%)
Similarity:705/1521 - (46%) Gaps:262/1521 - (17%)


- Green bases have known domain annotations that are detailed below.


Human     2 QRSPLEKASVVSKLFFSWTRPILRKGYRQRLELSDIYQI-PSVDSADNLSEKLEREWDRELASKK 65
            |.:|:.||:..||.||.|||.||.||.::.|:.||:|:. ||::|. .:|..|...|::||...|
  Fly     9 QPNPVTKANFFSKWFFIWTREILVKGLQRNLDPSDLYETEPSLEST-QVSSFLLGHWEQELKRSK 72

Human    66 NPKLINALRRCFFWRF----MFYGIFLYLGEVTKAVQPLLLGRIIASYDPDNKEERSIAIYL-GI 125
             |.::..:.:.:.|.|    :.|.|.......|   |||:||.:::.:.....:....:.|| .:
  Fly    73 -PNVLRMIFKAYGWSFVPASIVYSIMAIAVHTT---QPLMLGGLVSFFSESTGKITKHSAYLYAM 133

Human   126 GLCLLFIVRTLLLHPAIFGLHHIGMQMRIAMFSLIYKKTLKLSSRVLDKISIGQLVSLLSNNLNK 190
            |:.|..::..|..||.:..|..:|.::|:|...|:|:|.|::|....:....|..:||::.:|..
  Fly   134 GVVLCSLISGLFFHPFMKYLFRVGSRVRLACAGLVYRKFLRVSVAADNSGVSGYAISLMATDLPT 198

Human   191 FDEGLALAHFVWIAPLQVALLMGLIWELLQASAFCGLGFLIVLALFQAGLGRMMMKYRDQRAGKI 255
            |:|.....|.:|..||:..:.:.:|::|:...|..|||.::.....||...|.:.:|:...|...
  Fly   199 FNESFYCFHELWRGPLEGVVFVYIIYQLIGWPAVVGLGTIVAFIPLQAWAARAIARYKRSSADVG 263

Human   256 SERLVITSEMIENIQSVKAYCWEEAMEKMIENLRQTELKLTRKAAYVRYFNSSAFFFSGFFVVFL 320
            .||:.:.:|:|..:|.:|.|.||::..|:|..:|:.|:...|.:.|: |.............:||
  Fly   264 DERVKLMNEIIAAMQLIKMYAWEKSFAKLIGKVRKEEMDSIRGSTYI-YAGLQCTGMISKLSLFL 327

Human   321 SVLPYALIKGIIL-RKIFTTISFCIVLRMAVTRQFPWAVQTWYDSLGAINKIQDFLQKQE----- 379
            |::.|.....|:. :|:|...|:...|..::...:|.|:..|.::....|:::|||.:.|     
  Fly   328 SLVTYVFTGDIVTSQKVFIVASYYDHLNDSLLHSWPLAINMWVETFVVANRVKDFLFQHENPADG 392

Human   380 ----YKTLEYN--------------LTTTEVVMENVTAFWEEGFGELFEKAKQNNNNRKTSNGDD 426
                :|..|.|              .....:.:..::|.|::        .||...:|.      
  Fly   393 GVHNFKEAEDNPEHGNFFGRTHKPKAEVKSITVHKLSASWDQ--------KKQEKRHRH------ 443

Human   427 SLFFSNFSLLGTPVLKDINFKIERGQLLAVAGSTGAGKTSLLMVIMGELEPSEGKIKHSGRISFC 491
                          ::|::|:.:..|.:.:.|:.||||::||.||:|||:...|.::.:|.:|:.
  Fly   444 --------------IEDVSFQAQDQQFVGIVGTVGAGKSTLLQVILGELDIISGSVEVNGVLSYA 494

Human   492 SQFSWIMPGTIKENIIFGVSYDEYRYRSVIKACQLEEDISKFAEKDNIVLGEGGITLSGGQRARI 556
            .|..|::.|::::||:|...|||.||..|::.|.|:.|:.:....|:..:||||.:|||||:||:
  Fly   495 PQEPWLLRGSLRDNILFTEPYDEQRYLEVLRVCHLDRDVEQLPLGDSTRVGEGGASLSGGQKARV 559

Human   557 SLARAVYKDADLYLLDSPFGYLDVLTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHE 621
            |||||||:.||:||||.|...:|....|.:.:.|:.:.::.|.|||||.:::.|:..|.:::|..
  Fly   560 SLARAVYRKADIYLLDDPLSAVDSHVSKMLLDRCLNEFLSKKIRILVTHRVQLLRHVDHLVLLEG 624

Human   622 GSSYFYGTFSELQNLQPDFSSKLMGCDSFDQFSAERRNSILTETLHRFSLEGDAPVSWTETKKQS 686
            |                                             |.|::|.            
  Fly   625 G---------------------------------------------RISVQGH------------ 632

Human   687 FKQTGEFGEKRKNSILNPINSIRKFSIVQKTPLQMNGIEEDSDEPLERRLSLVPDSEQGEAILPR 751
                              .::::|.                    :..|:|:..|.|..:     
  Fly   633 ------------------YDALKKL--------------------IRFRMSVANDVEVAK----- 654

Human   752 ISVISTGPTLQARRRQSVLNLMTHSVNQGQNIHRKTTASTRKVSLAPQANLTELDIYSRRLSQET 816
                     |:|.|..||..                         .|:..        :.||||.
  Fly   655 ---------LRAMRTDSVYE-------------------------EPEPR--------KSLSQEE 677

Human   817 GLEISEEINEEDLKECFFDDMESIPAVTTWNTYLRYITV--HKSLIFVLIWCLVIFLAEVAASLV 879
            .:: ..||.::      |.:.:.|.:|.. .||..|..|  |..::.:::...|:..:..|...:
  Fly   678 HMD-RHEIEQQ------FKEQQQIGSVKL-QTYKEYFKVLGHPLVVVLILLMFVVARSSEATMDI 734

Human   880 VL--WLL--GNTPLQDKGNSTHSRNN-----SYAVIITSTSSYYVFYIYVGVADTLLAMGFFRGL 935
            .|  |..  ...|.|.:....:.|..     .|..:|..|..:||          |...|||.  
  Fly   735 FLSKWATWEETEPNQHEPIPEYHRTRLRMMILYTFLILCTLIFYV----------LRTFGFFM-- 787

Human   936 PLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLI 1000
                ..:.:|..:|.::...|::|.|.......:|.||||||.|:..:|..||..:.|.|:..:.
  Fly   788 ----MTLRISLRIHDQLFQGVIRAFMHFFTLATSGRILNRFSSDVLAIDVNLPQAMMDSIEFAVN 848

Human  1001 VIGAIAVVAVLQPYIFVATVPVIVAFIMLRAYFLQTSQQLKQLESEGRSPIFTHLVTSLKGLWTL 1065
            .:..:|||:....::.:....|:......|..::..|:.||::|:..||||::|...:.|||.|:
  Fly   849 ALAVLAVVSTANIWLLIPATVVVALLYGCRCLYIGASRSLKRIETISRSPIYSHTNATFKGLATI 913

Human  1066 RAFGRQPYFETLFHKALNLHTANWFLYLSTLRWFQMRIEMIFVIFFIAVTFISIL---TTGEGEG 1127
            ||.....|.|..||...|.:|:..:|::|..|.|....::|.|::.:||||..:|   ..|...|
  Fly   914 RALNGTKYMERDFHYYQNENTSALYLHVSINRAFAFWTDLICVLYILAVTFSFLLFDKHRGYYSG 978

Human  1128 RVGIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEGKPTKSTKPYKNGQLSKVMI 1192
            .||:.:|.:|.::...|..:..:::::::|.||.||.:::::|:|  |...|:            
  Fly   979 DVGLAITQSMKLVLMCQAGMRQTVELENMMTSVERVMEYVNIPSE--PAYETE------------ 1029

Human  1193 IENSHVKKDDIWPSGGQMTVKDLTAKYTEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAF 1257
             |:.::.|.  ||||||:..:||..:|:..|..||:.::|:|...:::|::|.|.:|||:::.|.
  Fly  1030 -ESVNLPKH--WPSGGQLDFRDLRLRYSNHGPYILKGLTFTIRGEEKIGIVGHTAAGKSSIVHAL 1091

Human  1258 LRLLNTEGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEV 1322
            .||.:..|.|.|||.....:.|...|:...:|||...:|||:.|.||||:|:.:|:|:|...:.|
  Fly  1092 FRLAHINGHISIDGFETSQLGLHDLRRRISIIPQDPVLFSGSLRFNLDPFEEKTDEELWLALEAV 1156

Human  1323 GLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRT 1387
            .|:..:......::..|.|.|...|.|.:||:||||::|.:.|||::||.:|::||.|..:|:..
  Fly  1157 KLKEFVSNLKDGINCRLHDCGANFSMGQRQLVCLARALLRQNKILIMDEATANVDPETDNLIQEA 1221

Human  1388 LKQAFADCTVILCEHRIEAMLECQQFLVIEENKVRQYDSIQKLLNERSLFRQAISPSDRVKLFPH 1452
            :...||.|||:...||:..:::..:.:|::..:|.:.....:||:.|..:.........|....|
  Fly  1222 IHTKFAHCTVLTIAHRLHTVMDNDRVMVVDMGRVVELGHPHELLHNRHGYLHRFVEKTGVGTAQH 1286

Human  1453 -RNSSKCKSKPQIAALKEETEEEVQD 1477
             |:.::...:.::...|.|.:..|.|
  Fly  1287 LRHLAEQSYRKRVLGRKSEDQGSVLD 1312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CFTRNP_000483.3 CFTR_protein 1..1480 CDD:273530 394/1521 (26%)
Disordered R region. /evidence=ECO:0000269|PubMed:10792060 654..831 20/176 (11%)
Interaction with GORASP2. /evidence=ECO:0000269|PubMed:21884936 1386..1480 19/93 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1452..1480 6/27 (22%)
PDZ-binding. /evidence=ECO:0000269|PubMed:11707463, ECO:0000269|PubMed:16331976 1478..1480 394/1521 (26%)
CG11898NP_651679.2 MRP_assoc_pro 2..1268 CDD:188098 386/1475 (26%)

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