| Sequence 1: | NP_000483.3 | Gene: | CFTR / 1080 | HGNCID: | 1884 | Length: | 1480 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_651269.1 | Gene: | Cftr / 42928 | FlyBaseID: | FBgn0039207 | Length: | 1402 | Species: | Drosophila melanogaster |
| Alignment Length: | 1550 | Identity: | 432/1550 - (27%) |
|---|---|---|---|
| Similarity: | 723/1550 - (46%) | Gaps: | 317/1550 - (20%) |
- Green bases have known domain annotations that are detailed below.
|
Human 2 QRSPLEKASVVSKLFFSWTRPILRKGYRQRLELSDIYQIPSVDSADNLSEKLEREWDREL----A 62
Human 63 SKKNPKLINALRRCFFWRFMFYGIFLYLGEVTKAVQPLLLGRIIASY------------------ 109
Human 110 -DPDNKEERSIAIYL-------------------------------------------------- 123
Human 124 ----------GIGLCLLFIVRTLLLHPAIFGLHHI-------GMQMRIAMFSLIYKKTLKLSSRV 171
Human 172 LDKISIGQLVSLLSNNLNKFDEGLALAHFVWIAPLQVALLMGLIWELLQASAFCG-LGFLIVLAL 235
Human 236 FQAGLGRMMMKYRDQRAGKISERLVITSEMIENIQSVKAYCWEEAMEKMIENLRQTELKLTRKAA 300
Human 301 YVRYFNSSAFFFSGFFVVFLSVLPYALI-KGIILRKIFTTISFCIVLRMAVTRQFPWAVQTWYDS 364
Human 365 LGAINKIQDFLQKQEYKTLEYNLT---------TTEVVMENVTAFWEEGFGELFEKAKQNNNNRK 420
Human 421 TSNGDDSLFFSNFSLLGTPVLKDINFKIERGQLLAVAGSTGAGKTSLLMVIMGELEPSEGKIKHS 485
Human 486 GRISFCSQFSWIMPGTIKENIIFGVSYDEYRYRSVIKACQLEEDISKFAEKDNIVLGEGGITLSG 550
Human 551 GQRARISLARAVYKDADLYLLDSPFGYLDVLTEKEIFESCV------CKLMANKTRILVTSKMEH 609
Human 610 LKKADKILILHEGSSYFYGTFSELQNLQPDFSSKLMGCDSFDQFSAERRNSILTETLHRFSLEGD 674
Human 675 APVSWTETKKQSFKQTGEFGEKRKNSILNPINSIRKFSIVQKTPLQMNGIEEDSDEPLERRLSLV 739
Human 740 PDSEQGEAILPRISVISTGPTLQARRRQSVLNLMTHSVNQGQNIHRKTTASTRKVSLAPQANLTE 804
Human 805 LDIYSRRLSQETGLEISEEINEEDLKECFFDDMESIPAVTTWNTYLR---YITVHKSLIFVLIWC 866
Human 867 LVI-----FLAEVAASLVVLWLLGNTPLQDKGNSTHSRNNSYAVIITSTSSYYVFYIYVGVADTL 926
Human 927 LAMGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTI 991
Human 992 FDFIQLLLIVIGAIAVVAVLQPYIFVATVPVIVAFIMLRAYFLQTSQQLKQLESEGRSPIFTHLV 1056
Human 1057 TSLKGLWTLRAFGRQPYFETLFHKALNLHTANWFLYLSTLRWFQMRIEMIFVIFFIAVTFISILT 1121
Human 1122 TGEG-EGRVGIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEGKPTKSTKPYKNG 1185
Human 1186 QLSKVMIIENSHVKKDDIWPSGGQMTVKDLTAKYTEGGNAILENISFSISPGQRVGLLGRTGSGK 1250
Human 1251 STLLSAFLRLLNTEGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEI 1315
Human 1316 WKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVT 1380
Human 1381 YQIIRRTLKQAFADCTVILCEHRIEAMLECQQFLVIEENKVRQYDSIQKLLNERS 1435 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CFTR | NP_000483.3 | CFTR_protein | 1..1480 | CDD:273530 | 431/1549 (28%) |
| Disordered R region. /evidence=ECO:0000269|PubMed:10792060 | 654..831 | 26/176 (15%) | |||
| Interaction with GORASP2. /evidence=ECO:0000269|PubMed:21884936 | 1386..1480 | 12/49 (24%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1452..1480 | ||||
| PDZ-binding. /evidence=ECO:0000269|PubMed:11707463, ECO:0000269|PubMed:16331976 | 1478..1480 | ||||
| Cftr | NP_651269.1 | MRP_assoc_pro | 12..1356 | CDD:188098 | 431/1544 (28%) |
| Blue background indicates that the domain is not in the aligned region. | |||||