DRSC/TRiP Functional Genomics Resources

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Protein Alignment YME1L1 and CG14183

DIOPT Version :9

Sequence 1:NP_647473.1 Gene:YME1L1 / 10730 HGNCID:12843 Length:773 Species:Homo sapiens
Sequence 2:NP_649172.3 Gene:CG14183 / 40192 FlyBaseID:FBgn0036931 Length:872 Species:Drosophila melanogaster


Alignment Length:669 Identity:125/669 - (18%)
Similarity:226/669 - (33%) Gaps:244/669 - (36%)


- Green bases have known domain annotations that are detailed below.


Human    48 PEHEAPSSECMFSDFLTK-------LNIVSIGKGKIFEGYRSMFMEPAKR-----MKKSLDTTDN 100
            |...|.|...|:.:.:.|       :|:::..:.::.:......||....     .|:..|.|.|
  Fly   296 PNQTANSIMEMYKNEMLKKKLDEDFINLINDERTRLLQFRSPWMMEDISDHIRAWFKEFYDATGN 360

Human   101 WHIRPEPFS--------------LSIPPSLNLRDLGLSELK------------------------ 127
            :|..|:|..              :....||..:.|..:|||                        
  Fly   361 FHPYPDPVKQGTVLVVIDETMTPMEFQESLGKKPLSKAELKKLRDKEKKEKRKKKEKLKQLKMKE 425

Human   128 ---------IGQID--------QLVENLLPGFCKGKNISSHWHTSHVSAQSFFENKYGNLDIFST 175
                     .|.||        :.:||:....   |..|..|.               |:|.:  
  Fly   426 AKRRKKLRDAGVIDIGYELTASKAIENIEETM---KKYSKDWR---------------NVDEY-- 470

Human   176 LRSSCLYRHHSRALQSICSDLQYWPVFIQSRGFKTLKSRTRRLQSTSERLA----ETQNIAPSF- 235
                 |.::|        ..::.|                    .|.|:||    |.:.:...: 
  Fly   471 -----LNKNH--------DPIKEW--------------------VTEEQLAKIHQEVRGLVDEYM 502

Human   236 -VKGFLLRDR-GSDVESLDKLMKTKNIPEAHQDAFKTGFAEGFLKAQALT-QKTNDSLRRTRLIL 297
             |:..|||:. ..|.:...|.:|.| .|:..::..|.       |.:.:| .:|.:||       
  Fly   503 RVEYELLREALAKDNDEKYKALKVK-YPKKKKEKRKK-------KPKDMTGDRTLESL------- 552

Human   298 FVLLLFGIYGLLKNP-------------------FLSVRFRTTTGLDSAVDPVQMKNVTFEHVKG 343
                    |..||:.                   |::...|...||           .|....||
  Fly   553 --------YNELKDAGIIEEIGHRDFDEFITDFNFVADDTRDEDGL-----------TTLGPAKG 598

Human   344 VEEAKQELQEVVEFLKNPQKFTILG-GKL----PKGILLVGPPGTGKTLLARAVAGEADVPFY-- 401
              :.|..:||           ::|| |:.    ||.:||:||..:||.||...:|.|.|..|.  
  Fly   599 --DIKMVIQE-----------SMLGMGEFDVPKPKSLLLIGPLNSGKRLLCEIIASELDAVFMNL 650

Human   402 -------YASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQT 459
                   ||...::   |:.|       :.:.|||..|.:::|:|...:..|::.......:.:.
  Fly   651 SPENTYKYAKDLKY---FLHV-------ILKVAKAFQPTIMYIEEAHRLFWKKVPPEAVEINPRL 705

Human   460 INQLLAE--MDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNK 522
            :...||.  :...|.|:.::::|.:|.|.|.:..:.|  .|...:.:|:.|.  .|..|.|.  :
  Fly   706 LGTSLASKILKPLKKNDKIVLVGTSNMPWAANGGIKR--AFQKVLLIPKCDY--GTSFLLWL--E 764

Human   523 IKFDQSVDP------EIIARGTVGFSGAELE-------NLVNQAALK-AAVDGKEMVTMKELEFS 573
            :..:.:.|.      ..:||....::..:::       |:..:..|| .|:|..|.:   |...|
  Fly   765 LMTENAPDDMKEYAYSALARVLQAYNSGDIDDNVKETLNIDRKMRLKNEALDPNEFL---EYFLS 826

Human   574 KDK-ILMGPERRSVEIDNK 591
            |:: .:..|:.:.::..||
  Fly   827 KNEPPIFPPDEKIMDKFNK 845

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
YME1L1NP_647473.1 P-loop_NTPase 331..>395 CDD:304359 20/68 (29%)
FtsH_fam 333..766 CDD:273520 64/290 (22%)
AAA 375..506 CDD:278434 33/141 (23%)
Peptidase_M41 586..764 CDD:279742 2/6 (33%)
CG14183NP_649172.3 AAA 622..751 CDD:278434 33/140 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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