DRSC/TRiP Functional Genomics Resources

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Protein Alignment YME1L1 and CG6512

DIOPT Version :9

Sequence 1:NP_647473.1 Gene:YME1L1 / 10730 HGNCID:12843 Length:773 Species:Homo sapiens
Sequence 2:NP_730248.2 Gene:CG6512 / 39922 FlyBaseID:FBgn0036702 Length:826 Species:Drosophila melanogaster


Alignment Length:586 Identity:226/586 - (38%)
Similarity:338/586 - (57%) Gaps:63/586 - (10%)


- Green bases have known domain annotations that are detailed below.


Human   235 FVKGFLLRDRGSDVESLDKLMKTKNIPEAHQDA--------FKTGFAEGF---LKAQALTQKTND 288
            ||..:|.:   ..||.|:.:.|........|::        |..|..:.|   |:| |.|::..:
  Fly   193 FVNSYLSK---GVVEKLEVVNKKWVRVRLQQNSNSGSGVLWFNIGSVDSFERNLEA-AQTEQGTE 253

Human   289 SLRRTRLI-------------LFVLLLFG--IYGLLKNPFL--SVRFRTTTGLDSAV-------- 328
            |:....:|             |..||:.|  :|.:.|:..:  ..|.|...||...|        
  Fly   254 SINFVPVIYRNEVEAASLTGLLPTLLIIGFLVYMMRKSADMMGGGRGRKGGGLFGGVMQSTAKLT 318

Human   329 DPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVA 393
            :|.:: .|.|:.|.|.||||.|:.|.|.||||||::..||.|:|||.:|.|||||||||||:|.|
  Fly   319 NPNEI-GVGFKDVAGCEEAKIEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATA 382

Human   394 GEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQ 458
            |||:|||...|||||.|||||||.||:|::|..|:.:|||::||||:|:||.||.......:|.|
  Fly   383 GEANVPFITVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCILFIDEIDAVGRKRGGKTFGGHSEQ 447

Human   459 --TINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLN 521
              |:||||.|||||.....|:::.|||..:.||.||:||||||.|:.||.||:|||..|.|.:|.
  Fly   448 ENTLNQLLVEMDGFNTTTNVVVLAATNRVDILDKALMRPGRFDRQIYVPAPDIKGRASIFKVHLG 512

Human   522 KIKFDQSVDPEIIARG----TVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPE 582
            .:|  .|:|...::|.    |.||:||::.|:.|:|||.||.|.|:.:.:|..|.:.::::.|.|
  Fly   513 NLK--TSLDKNELSRKMAALTPGFTGADIANVCNEAALIAARDSKDSIVLKHFEQAIERVIAGME 575

Human   583 RRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDRWNETRAQL 647
            :::..:..:.|...|:||:|||:..::.:.|.|:.|.:|:|||..||:...||: |.:..::.||
  Fly   576 KKTNVLAPEEKRTVAHHEAGHAVAGWFLEHADPLLKVSIIPRGKGLGYAQYLPK-DHYLLSKEQL 639

Human   648 LAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDTGK---- 708
            ..:|.:::||||||||.|  :.|||||..|....|.||...|.:|||:||:|.::: |.|:    
  Fly   640 FDRMCMTLGGRVAEELFF--NRITTGAQDDLKKITDIAYSQVVRFGMNEKVGQVSF-DVGQAGDP 701

Human   709 -----LSPETQSAIEQEIRILLRDSYERAKHILKTHAKEHKNLAEALLTYETLDAKEIQIVLEGK 768
                 .|.:|...|:.|:|.:::.::|....:|..|.:..:.:||.||..|.| :::..|.|.|.
  Fly   702 VFSKPYSEDTAQLIDNEVRSIIKCAHEATTSLLTKHKENVQKVAERLLQNEVL-SRDDMIELLGP 765

Human   769 K 769
            :
  Fly   766 R 766

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
YME1L1NP_647473.1 P-loop_NTPase 331..>395 CDD:304359 37/63 (59%)
FtsH_fam 333..766 CDD:273520 195/447 (44%)
AAA 375..506 CDD:278434 77/132 (58%)
Peptidase_M41 586..764 CDD:279742 63/186 (34%)
CG6512NP_730248.2 FtsH_ext 163..259 CDD:284011 16/69 (23%)
FtsH_fam 271..764 CDD:273520 208/500 (42%)
AAA 365..496 CDD:278434 76/130 (58%)
Peptidase_M41 580..762 CDD:279742 64/186 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0465
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D217929at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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