DRSC/TRiP Functional Genomics Resources

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Protein Alignment YME1L1 and Rpt4R

DIOPT Version :10

Sequence 1:NP_647473.1 Gene:YME1L1 / 10730 HGNCID:12843 Length:773 Species:Homo sapiens
Sequence 2:NP_648525.1 Gene:Rpt4R / 39351 FlyBaseID:FBgn0036224 Length:398 Species:Drosophila melanogaster


Alignment Length:413 Identity:126/413 - (30%)
Similarity:191/413 - (46%) Gaps:74/413 - (17%)


- Green bases have known domain annotations that are detailed below.


Human   214 RTRRLQSTSERLAETQNIAPSFVKGFLLRDRGSDVESLDKLMKTKNIP-EAHQDAFKTGFAEGFL 277
            |.|.|.:...:|.|.:.|.             |.:::|....|..|.. |..:|..|...:.|.:
  Fly    14 RVRALTNYRTKLLEHREIE-------------SKLKALRDKYKVVNAEYEKSEDDLKALQSVGQM 65

Human   278 KAQALTQKTNDSL--------------RR----------TRLILFVLLLFGIYGLLKNPFLSVRF 318
            ..:.|.|.|.|:.              ||          ||:.|.|..|           ..:|:
  Fly    66 VGEILKQLTPDNFIVKASNGPRYVVGCRRQINKEKLKPGTRVALDVTTL-----------TIMRY 119

Human   319 RTTTGLDSAVDPVQMK-------NVTFEHVKGVEEAKQELQEVVEF-LKNPQKFTILGGKLPKGI 375
                 |...|||:...       ||.:..:.|:.:..:||:||:|. |.||..|..:|...|||.
  Fly   120 -----LPREVDPLVYNMTHEDPGNVNYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGC 179

Human   376 LLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDEL 440
            ||.|||||||||||||:|.:.|..|.....|...:.::|..|..||.:|..|:.:.||:||:||:
  Fly   180 LLYGPPGTGKTLLARAIASQMDANFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEI 244

Human   441 DSVGGKRIE--SPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVT 503
            |::||:|..  :......::|:.:||.:||||.....|.:|.|||.|:.||.||:||||.|.::.
  Fly   245 DAIGGRRFSEGTSADREIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLE 309

Human   504 VPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMK 568
            :|.|:...|.:|||.:...:.....:|.|.:.:.:..|:||:|.|:..:|.|.|....:|.|..:
  Fly   310 IPLPNEVARMDILKIHAEPLNKRGEIDYEAVVKLSDLFNGADLRNICTEAGLFALRCDREFVIQE 374

Human   569 ELEFSKDKILMGPERRSVEIDNK 591
            :...:..||          .|||
  Fly   375 DFMKAVRKI----------ADNK 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
YME1L1NP_647473.1 HflB <332..767 CDD:440233 96/270 (36%)
Rpt4RNP_648525.1 PRK03992 13..388 CDD:179699 126/413 (31%)

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