DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42811 and CG13613

DIOPT Version :10

Sequence 1:NP_001189279.1 Gene:CG42811 / 10178941 FlyBaseID:FBgn0261993 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001097900.2 Gene:CG13613 / 42910 FlyBaseID:FBgn0039193 Length:219 Species:Drosophila melanogaster


Alignment Length:216 Identity:111/216 - (51%)
Similarity:139/216 - (64%) Gaps:14/216 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYITGVHFMGAL----LSLWSILRPILAELPLLFPASSVYQITSSLSVPVVIPDR-KLFWDWGLQ 60
            ||.:.:..:|.|    |.|.:::|||..  .||||.|:|.|:|||:|:|..:..| |:|.|.|.|
  Fly     1 MYRSKLQNVGDLGQVSLLLITLIRPIYG--LLLFPTSTVLQLTSSISIPADLNTRTKVFMDMGFQ 63

  Fly    61 MNYALPAEPSSFYAATIWPDEFSRRRKRQLWN----ETAKYLPEGVSTMHPSDFTAGELYESLEN 121
            |||.||...|:||.||||.||.|||:||||.:    ...:|..||  .|||:|||||:||:.:||
  Fly    64 MNYNLPPTVSAFYNATIWADELSRRQKRQLDHSLDANLQQYDLEG--GMHPADFTAGQLYKGIEN 126

  Fly   122 MLIQYGFDESCLLRSVCELARHPF-KDVENNMLTALLTFTLTPSLHEAFAPGENVYREVYEHAEQ 185
            ||..|||..|||||||||||.||| :|....|:|.::||.||||.||.||..|..||:.||.|||
  Fly   127 MLETYGFHRSCLLRSVCELALHPFAEDHFYGMVTQVITFLLTPSQHEGFADDEQHYRDKYEKAEQ 191

  Fly   186 QGFLGMDCGHLYSNCPVDFLS 206
            .||||..|...|.:|..|.::
  Fly   192 IGFLGGQCHLSYPSCQADIIN 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42811NP_001189279.1 DM4_12 107..206 CDD:214785 58/99 (59%)
CG13613NP_001097900.2 DM4_12 117..206 CDD:462285 52/88 (59%)

Return to query results.
Submit another query.