Domains
Highlight Regionselect the species and region you wish to highlight AlignmentAlignment done with MAFFT FFT-NS-2 (v7.305b) aligner. MAFFT References
Download raw alignment output file Note:   &mbsp 2019, we've been having trouble with some alignments and are looking into the problem. If the alignment didn't work, please try again. If it still doesn't work, please download the fasta file and align off line. We're looking into it. Thanks. hs  MA--------------------------------------------------TV------------------------------------------------------------------ [4]
mm  MA--------------------------------------------------TA------------------------------------------------------------------ [4] rn  MA--------------------------------------------------TA------------------------------------------------------------------ [4] xt  MA--------------------------------------------------TA------------------------------------------------------------------ [4] dr  ------------------------------------------------------------------------------------------------------------------------ [0] dm  MAQSTTN-------------------NWSFQPLHRQRS--------------TSGYPQHVLNTVPETA------------VLTTPPPTRKP---------------LTIQIAGVAAAESG [60] ag  MGSRCCNIFPLCISANAERDVECSGSNWFTRPHSRRKSGKKVKVTFSDQLDTTASDDGSVPSTSPSPSTSAQARWRYLEQIFVPPSPEAAPNRSGPAFDRTSSLRQSGTSYASVGSASSG [120] ce  MEVQSLTI--------------------------------------------TTNYP-------PKPA---------------SPNPQD------------------------------- [23] is  ------------------------------------------------------------------------------------------------------------------------ [0] sc  MS------------------------------------------------------------------------------VDLFPNDRF------------------------------- [11] sp  MQ--------------------------------------------------TE--------------------------I--------------------------------------- [5]                                                                                                                              hs  -------------------MA-ATAAERAVLEEEFRWLLHDEVHAVLKQLQDILK----------EASLRFTLPGSGTEGPAKQENFIL----GSCGTDQVKGVLTLQGDALSQADVNLK [90] mm  -------------------MA-ASAAERAVLEEEFRWLLHAEVHAVLRQLQDILK----------EASLRFTLPGPSTEGPAKQENFIL----GSCGTDQVKGTLTLQGDALSQADVNLK [90] rn  -------------------MA-ASAAERAVLEEEFRWLLHAEVHAVLRQLQDILK----------EASLRFTLPGPSTEGPAKQENFIL----GSCGTDQVKGVLTLQGDALSQADVNLK [90] xt  -------------------AASASSTERSVLEEEFKWLLKEEVHSVLKQLQDILK----------EASRRFTLPGGVGEGPTKQENFAL----GTTSSDQVKGILTLQGDTLCQAEVNLK [91] dr  -------------------MTAASQAERTVLEEEFNWLLKEEVHAVLKQLQDILK----------EASRRLSMPSPGLEGQLKQENFIL----GSSTMDQVKGVLTLQGEALTQADINIK [87] dm  -HKRRFLAARKKPKSAMKMLADTEREEALNLQIEFEWVLRQEVHAILKQLRSILV----------ECAHRFPVPLYENEGK-KTEKFIL-----TVSPDQLKAVLTLTGDAITQADISFK [163] ag  PYNRRPPPQRKVGQK----MADCEKEEALNLQVEFEWVLHEEVHSVLKQLHVILV----------ECAHRFPVPLYGNEGK-KQDKFVL-----TAAPEQLKCIVTLTGDSITHADINFK [220] ce  -------------------IRDTIRSNKTN---ENLWIQRKDVDTTLRSALEHLKACCIVLNLSAKCDERLNVAVSHG----TTEKYQL--MSRTGSSDNLKAAVTLLDDNVIQAEVTVK [115] is  -------------------MAEADVDEIEALHAEFEWLLQEEVNIVLEQLQGVIM----------ECSKRFPVSIPDVDAPVKSEKFFMTSTSSTSSSDQIKVVVTLTGDNISHADITLR [91] sc  -------------------GAEDKYDNFKDAVKECSWLIEEIVKPQLPNIIDNFSKCLEML----ESDQIFKMPVSNG---IPNE------SNKQNDSPTVKGVITRQGQYIVDFHIVVR [99] sp  --------------------------DASVIVKEKEWLETNVLPEFWESMSEGLK----------EALNLIS----------SDDPTVL--VFTSPKTDAVKGIVSRSSSNVVRVNVTAK [77]                               :      *  *:    :     .    :           :.   :             :               :*  ::  .. :   .:  : hs  MPRN-NQLLHFAFREDKQWK-------------------LQQIQ---DARNH----------VSQAIYLL--------TSRDQSYQFKTG--------AEVLKLMDAVMLQLT------- [154] mm  MPRN-NQLLHLAFREDKQWK-------------------LQQIQ---DARNH----------VSQAIYLL--------ANRDESYQFKTG--------AEVLKLMDAVMLQLT------- [154] rn  MPRN-NQLLHFAFREDKQWK-------------------LQQIQ---DARNH----------VSQAIYLL--------ANRDESYQFKTG--------AEVLKLMDAVMLQLT------- [154] xt  TLRT-NQLLHFAFREDKQWK-------------------MQQIQ---DARNH----------VNQAIYLL--------TNRGENYTFQTG--------AEVLKLMDAVMLQLT------- [155] dr  VAKS-SQVMHFAFRDDKQWK-------------------LQQIQ---DARNH----------VNQALQLL--------SSRDDSYHFKTG--------AEVNKLMDAIMLQLT------- [151] dm  LCKAPSQTQRTSITHDSPWK-------------------LQQVQ---DAANH----------LQTAINHI--------DDVDDSYHFKTS--------DEVLHVIGNILDALQ------- [228] ag  VQRQQQQIQRTSITQDYPWK-------------------IQQVQ---DAANH----------LQQAINHI--------DNVDSAYHFKTS--------DEVLHILGNILGALQ------- [285] ce  YPKAGGGYYRAVAQPDVQWK-------------------LQQLQ---DLGNHISRVTITLCDLQHEVNLLK------GDGERDAFTLATG--------ARILEELKLTMNEIS------- [192] is  IPKHAMPNLRTIVQNDCQWK-------------------LQQVQ---DAGNN----------LLQALSLLT------PPPLKTRFEFKSA--------EEVTQLMTTIMGCLQ------- [158] sc  FPQF-QRGKQVMFRMNTGLNFLLIQFSKIMTHLKNILEILNQLQVATDVSEFVSKFGVAMELLNHSLILLQNPPRDLVFPEDNNFAMKEMFQDCYSVCESTAHILGLELTLCRNELCIEL [218] sp  VGRT-THVLK--LKDSAIIH-------------------LDQIL---NLSNY----------MHYALYCLP------RLRHNTERAIKEL--------QEILHAIVCLLHSIMQE----- [143]       :      :     .   :                   ::*:    :  :           :   :  :                :               . :   :            hs  ------------------------RARNRLTTPATLTLPEIAASGLT-------------------------RMFAPALPSDLLVNVYINLNKLCLTVYQLHALQPNSTKNFRPAGGAVL [225] mm  ------------------------RARSRLTTPATLTLPEIAASGLT-------------------------RMFAPTLPSDLLVNVYINLNKLCLTVYQLHALQPTSTKNFRPAGGAVL [225] rn  ------------------------RARNRLTTPATLTLPEIAASGLT-------------------------RMFAPTLPSDLLVNVYINLNKLCLTVYQLHTLQPTSTKNFRPAGGAVL [225] xt  ------------------------RARNRLTTPATMTLPEVATSGLT-------------------------KMFTPALPPDILLNFYVNVNKLCLLVYQLHALQPNSTKNFRPSGSAVL [226] dr  ------------------------RARNRLTTPASMTLPELAASGLM-------------------------KMFTPPMPGDVMVNFYINLSKLCLTVYQLHVLQPNTTKNFKPAGSSVL [222] dm  ------------------------RGRNSLLVPKKKPIDELIKGRNM-------------------------KSLVPNLPEDLAVSFYLQSHKLIIAVYQL------------------- [280] ag  ------------------------RGRTSLVVPRKKPIDELMKSRNM-------------------------KALSPNLPEDLAISFYIQSHKLIFVAYQL------------------- [337] ce  ------------------------LARNSIMLPRKRSLLELCYFPPT-------------------------RKFVPPLPQDQLISFYISCCRLVCASYQM------VPKTVHPQGLSVF [257] is  ------------------------RGRASLIIPKKRTIEEILGSRNMNSSAALHTGTAIPARSSRTPLMLQQKSLQPPLPSDIAASFYVQSHKLVFAVYHIH------------------ [236] sc  RNLIKVTKKPWCEIDSKTGRSFCDQIRNQVTNERNKTLSKILSENGV-------------------------QVQDSTLLNHIISSFQSEAITL-------------------PEAQELL [294] sp  ----ESEKE---EIPSNAS-SISLKSQNSIVSRTSNPFSCLNHSPRQ-----IH-------KTVRN------HLFSPPLPSNLALSFSISNASVCLHLFRLS------------------ [219]                               :  :    . .:  :                               :   . :  .   ..  .   :                           hs  HSPGAMLDPLTAHSEWGSQRLEVSHVHKVECVIPWLND---------ALVYFTVSLQLCQ-QLKDKISVFSSYWSYR-----PF---- [294] mm  HSPGAMF-------EWGSQRLEVSHVHKVECVIPWLND---------ALVYFTVSLQLCQ-QLKDKIAVFSSYWSSR-----PF---- [287] rn  HSPGAMF-------EWGSQRLEVSHVHKVECVIPWLND---------ALVYFTVSLQLCQ-QLKDKISVFSSYWSSR-----PF---- [287] xt  HNPGAMF-------ELNNQRFEVSHVHKVECVVPWLND---------ALVFFTVSLQLCQ-QLKDKISVFSSYWNFR-----PY---- [288] dr  HNPGAMF-------EHNNTKFEVSHVHKVECVVPWLND---------TLVFFTISLQLCQ-QLKDKISVFSSFWNYR-----PF---- [284] dm  ------------LNNQGTMRFDSRQ---AEASVQWLND---------VLLLLMNGQKLCQ-QLKDKISVFSVYKDFTVGSRSPSALSY [343] ag  ------------TNFQGTMKFDSCQ---AECSVPWLNE---------VLVLFTVALQLCQ-QLKDKISVFSQYKDFTVGSRSPSALSY [400] ce  M---------------------------AESQLPHLDD---------VIKHLNTVMAILQ-KLINYLSATMS---------------- [292] is  ------------KDSHGQPKFDVFH---AEASVPWLSE---------VLVLFTIALQLCQ-QLKDKVGVFYQFRDFQIP--------- [290] sc  R-------RGV--------TFDNRVVMECEKLIVSTSD--------PTLISISAKLNSLKASMANHQANLVASKQLSTYK-------- [351] sp  ------------GPNEVLESFAKNSVD-IEMLKPFVSQRIDAFSQDPILLAVTAKLSALQ-KKVNDVS-----YRFKTISSSLYGAK- [287]                                  *      .:          :  .       : .  :  .                     Alignment DetailsAlignment done with MAFFT FFT-NS-2 (v7.305b) aligner. MAFFT References
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