Domains
Highlight Regionselect the species and region you wish to highlight AlignmentAlignment done with MAFFT FFT-NS-2 (v7.305b) aligner. MAFFT References
Download raw alignment output file Note:   &mbsp 2019, we've been having trouble with some alignments and are looking into the problem. If the alignment didn't work, please try again. If it still doesn't work, please download the fasta file and align off line. We're looking into it. Thanks. hs  MSGMEKLQNASWIYQQKL--EDPFQK-----------HLNSTE-----------------------EYLAFLCGPRRSH----------------------------------------- [43]
mm  ---MGKLENASWIH-------DSLMK-----------YLNSTE-----------------------EYLAYLCGPKRSD----------------------------------------- [35] rn  ---MGKLENASWIH-------DPLMK-----------YLNSTE-----------------------EYLAHLCGPKRSD----------------------------------------- [35] xt  ---MDDQQNITFMWPSHLPPDNSMMR-----------YLNSTE-----------------------EYLAYLCGPKRSR----------------------------------------- [42] dr  ---MIPKPNCSST-------DSSTPKCIQDLLCNTSVALNLTEMEIEDFCLDQ------------DEYLEKYLGPRRSP----------------------------------------- [57] dm  ------------------MSAGN-------------------------MSHD--------------------LGPPRDP---------------------------------------LA [18] ag  MMELSPT----------VGSSGSLLA---------ALITNGTNGRT-GLLHDI------------LDGHRTLLHQPHQPQQQQHYNHPHHQQYQPQYLYANESLSGSVPESASYGTDSIC [88] ce  -----------------------MSQC--------TVEYNVSEIT---------------------EYVLSTLGERCQS---------------------------------------AG [29] ce6 -----------------------MLQA----------CLNTTEDQCDCLAFNCPIVYSHSESEKEACYMEHCFISKRAL--------------------------------------DDV [49] is  ---MSPSAPSSYL-DIRMATEGLMID---------PPV-NASAAET--LLLN--------------------LGPKRDP---------------------------------------LT [45]                                                                                                                              hs  FFLPVSVVYVPIFVVGVIGNVLVCLVILQHQAMKTPTNYYLFSLAVSDLLVLLLGMPLEVYEMWR-NYPFLFGPVGCYFKTALFETVCFASILSITTVSVERYVAILHPFRAKLQSTRRR [162] mm  LSLPVSVVYALIFVVGVIGNLLVCLVIARHQTLKTPTNYYLFSLAVSDLLVLLLGMPLEVYELWH-NYPFLFGPVGCYFKTALFETVCFASILSVTTVSIERYVAIVHPFRAKLESTRRR [154] rn  LSLPVSVAYALIFLVGVMGNLLVCMVIVRHQTLKTPTNYYLFSLAVSDLLVLLLGMPLEIYEMWH-NYPFLFGPVGCYFKTALFETVCFASILSVTTVSVERYVAIVHPFRAKLESTRRR [154] xt  LSLPMTLVYATIFLIGVIGNTLVCLVILKHHNMRTPTNYYLFSLAVSDLLVLLLGMPLEVYEMWS-NYPFLFGAWGCYFKTVLFETVCFASILSVTTVSVERYVAIIHPFQAKLKSTRSR [161] dr  VFLPVCLTYLLIFLVGAVGNILTCIVIAKNKVMRTPTNFYLFSLAISDLLVLLLGMPLELYEMWS-NYPFLLGKGGCYFKTLLFETVCFASILNVTALSVERYIAVIHPLRAKYVVTRTH [176] dm  IVIPVTVVYSLIFITGVVGNISTCIVIKKNRSMHTATNYYLFSLAISDFLLLLSGVPQEVSYIWS-KYPYVFGEYICIGRGLLAETSANATVLTITAFTVERYIAICHPFLGQAMSKLSR [137] ag  IILPITIFYCFIFVAGIVGNLSICVVIAKNKSMHTATNYYLFNLAVSDFLLLLFGMPQELYGTWN-PFAYPFNQIACIIMGLLSETAANATVLTITSFTVERYIAICHPFRSHTMSKLSR [207] ce  IVIPTVIIYGTIFLLGLFGNICTCIVIAANKSMHNPTNYYLFSLAVSDIIALILGLPMEFYQSLDYSYPYRFSEGICKARAFLIEFTSYASIMIICCFSFERWLAICHPLRSKIFSTLWR [149] ce6 TLYKVTALYIFIFLVGVIGNTTTCLVMKKHPMMKTHASMYLMNLAVSDLVTLCVGLPFEVMMNWN-QYPWPFPDYICNLKALIAETTSSVSILTILIFAIERYVAVCHPLFLMKVQPFKR [168] is  TVIPMTFIYSILLVSGVIGNVCTCIVIARNRYMHTATNYYLFSLAVSDLLLLVLGLPQELYQLWE-RHPYVFGEAFCILRGLTSETSTNASILTITAFTIERYVAICHPLRAHTMSKLSR [164]             *  ::: * .**   *:*:  :  ::. :. **:.**:**:: *  *:* *.       ..: :    *       *    .::: :  .:.**::*: **:         : hs  ALRILG-IVWGFSVLFSLPNTSIHGIKFHYFPNG--------------SLVPGSATCTVI-----KPMWIYNFIIQVTSF-LFYLLPMTVISVLYYLMALRLKKDKS-LEADEG------ [254] mm  ALRILS-LVWSFSVVFSLPNTSIHGIKFQQFPNG--------------SSVPGSATCTVT-----KPIWVYNFIIQATSF-LFYILPMTLISVLYYLMGLRLKRDES-LEADKV------ [246] rn  ALRILS-LVWSFSVVFSLPNTSIHGIKFQHFPNG--------------SSVPGSATCTVT-----KPMWVYNLIIQATSF-LFYILPMTLISVLYYLMGLRLKRDES-LEANKV------ [246] xt  ALKILV-TLWIFSILFSIPNTSTHGILLQYFPNG--------------SLIPDSATCTVV-----QPLWIYNCIIQVTSL-LFYILPMGVISVLYCLMGIKLRGDHS-LEADKM------ [253] dr  AKRLIL-SVWSISVLCAIPNTILHGIFTLPPPKGKA-----------AGVMLDSATCMLV-----KPRWMYNLIIQITTL-LFFLLPMLTISVLYLLIGMQLKREKM-LQVLEAKA---- [273] dm  AIRIIV-LVWIMAIVTAIPQAAQFGIEHYS----------------------GVEQCGIV-----RVIVKHSF--QLSTF-IFFLAPMSIILVLYLLIGVHLYRSTL-VEGPASVARRQQ [225] ag  AIKFVI-VIWLVAFGLATPQALQFGVVETN----------------------TTRLCTIK-----NEHFSHAF--EVSSF-LFFVGPMTLIAVLYVLIGIKLRKSKL-LQG---VKRASS [292] ce  ANVLII-LAWTISFVCALPIAFIVQINKLPLPEDAKYQPWTNKVSTDGIFVLHTEFCAMN-----QSRPDQQKMIIIFAFTVFFVIPAIAIVIMYAHIAVQLESSEIDLKGDKMVKKR-- [261] ce6 NIGTIIGFTWIFSILCAMPFAIHHRADYIM-------KSWPG--TDNRIPVKSSKMCMIAVMFEPKLASTFKILFHFSAI-AFFALPLFTIVILYARIACKVSSNRT-IQPGEL------ [271] is  AVKFVV-VIWVLSALCAIPLAVQFGIVHQSVDGT--------------TVLPESAECTVK------EPLEHAF--ELSTF-AFFLLPMSVILVLYVCIALQLKRSN-------ALSRQDV [253]         :    * .:   : * :                                   * :                   ::  *:  *   * ::*  :. ::  .                hs  ----------------------------------------------------NAN---I----QRPCRKSVNKMLFVLVLVFAICWAPFHIDRLFFSFVEEWSESLAA-----------V [304] mm  ----------------------------------------------------TVN---I----HRPSRKSVTKMLFVLVLVFAICWTPFHVDRLFFSFVDEWTESLAA-----------V [296] rn  ----------------------------------------------------AVN---I----HRPSRKSVTKMLFVLVLVFAICWTPFHVDRLFFSFVEEWTESLAA-----------V [296] xt  ----------------------------------------------------SVN---V----QRPSRKSITKMLFVLVMVFGICWAPFHVDRLFFSFVLDWTEPLAN-----------A [303] dr  -----------------------------------------SSGL-----DSSSN---VRSQQQKTRRQQVTKMLFVLVVMFGICWAPFHTDRLMWSFMDQKDSEHIE-----------I [333] dm  LKSVPSDTILYRYGGSGTAM---------SFNGG-----GSGAGTAGLMGGSGAQLSSVRGRLNHYGTRRVLRMLVAVVVCFFLCWAPFHAQRLIAIYA----PARGAKLRDQHEF---V [324] ag  DYTTPPR-------------------------------------------GISAQ-------------SRVIRMLVAVVATFFICWAPFHAQRLMAVY--------GVFSKTENVFFYKV [348] ce  --------------------------------------------------RNKSN-------------RTVLKMLLSVVITFFICWLPFHIQRLLSVYT-TWSETTTISPPVQ------F [311] ce6 --------------------------------------------------DITEEL-----------QMRINAILCAIVSAFFICYLPFQLQRLLFFYF-------------DNEV---I [314] is  DHRCP----VVHNGKSATAAEKEMVQPVHKFQRGCQLRKSTKSGS-----GTSSS------------RKAVINMLIAVVVAFFICWAPFHAQRLMAVYIKDPTPA--------HEL---A [341]                                                           .               :  :*  :*  * :*: **: :**:  :                       hs  FNL----VHVVSGVFFYLSSAVNPIIYNLLSRRFQAAFQNVISSFHKQWHSQHDPQLP---------------------------------------------------PAQRN------ [363] mm  FNL----IHVVSGVFFYLSSAVNPIIYNLLSRRFRAAFRNVVSPSCKWCHPQHRPQGP---------------------------------------------------PAQKV------ [355] rn  FNL----IHVVSGVFFYLSSAVNPIIYNLLSRRFRAAFRNVVSPTCKWCHPRHRPQGP---------------------------------------------------PAQKI------ [355] xt  FNL----THVVSGVFFYLSSAVNPLIYNLLSRRFRSAFQNVLPPFFKSL----KPKIPVQ----------------------------------------------SLAPPKST------ [363] dr  FEVY-EYVHVISGVFFYLSSAINPVLYNLMSTRFREMFKEVM------CHHKWRP-----------------------------------------------------VPRKRS------ [387] dm  YTV----MTYVSGVLYYLSTCINPLLYNIMSHKFREA----F---KAVLFGKKVSKG---------------------SLNSRN---------------NIESRRLRRALTNSS-----Q [392] ag  YMV----LNYTSGILYFLSTCINPLLYNIMSHKFRDASRHTL---KMSCCGGKRSKSDGQHHTYSAVSRYGVTGCGSFKVNSNNMACIGAGIGLGTGGGNAASKQQHQQPGNGTAATPNQ [461] ce  LSM---IVFYISGFCYYSNSAANPILYNILSQKYRSAFCRTI---------------------------------------------------LGDHIANFVFKG-HQRPGQSKRCS--- [373] ce6 LTWVNQYMYFISGFLFYLATIINPIAYNLASSRFRRAFKDIL-------------------------------------------------I-------DYCWRGGSERYPRSSFSK--- [375] is  FSL----LTYISGVTYYVSATINPILYSIMSLKFRQAFRDTL----MRCCGRRAARH-----------------------------------------------------GKSASVT--- [397]                **. ::  :  **: *.: * :::      .                                                                     .         hs  ------------------------------------IFLTECHFVELT-----------------------EDIGPQFPCQS--------------------SMHNSHLPAALSS----- [399] mm  ------------------------------------IFLTECHLVELT-----------------------EDAGPQFPCQS--------------------SIHNTQLTTVPCV----- [391] rn  ------------------------------------IFLTECHLVELT-----------------------EDAGPQFPGQS--------------------SIHNTNLTTAPCA----- [391] xt  ------------------------------------LILTVRNRMDSG-----------------------EEGSPSFPHRT--------------------SVCSSHLSTVL------- [397] dr  ------------------------------------LSMTRVTVRSTV-----------------------SDVPP----------------------------CNGTVTIEGDD----- [415] dm  TQR---------------------------------FSIESA-----------------------------EQPKP--------------------------SIMQNPTNKPP------- [417] ag  CQQESNMSLLANESCNRGTMPPIAIRPTFTRADSHCISISSSQSTTGTNVSSNGKLSRSSNGSLRHGGSALEQPTDHAGGGGGGGRLSTIAEKLRRGTKKVLAFSKSPTGTPSRSIVSGA [581] ce  ------------------------------------SSTEAEQRTLMT------------RGSV-------RVDKPH---------------------RKL-EVHNY------------- [403] ce6 ------------------------------------YSLAHTPLRQAM-------------------------------------------------SNRV-PILDSKTNA--------- [400] is  --------------------FPSGFRSTFRSS----VAFESSDFTLLT------------DGLL---------PPPY-----------TVEAILAQRAKNV-VICIDECSEPASS----- [455]                                                                                                                              hs  ------------------------------------EQMSRTNYQSF--HFNKT-- [415] mm  ------------------------------------EEVP---------------- [395] rn  ------------------------------------GEVP---------------- [395] xt  -------------------------------------------------------- [397] dr  ------------------------------------YDVDEGQE-------NKTCP [428] dm  ---------------------------------------VAAQYAMIGVQVN---- [430] ag  CAEGTNGRRKAYRKRNSCDSVDTNTISNSSLKEFDEEEFSSAELARFMGEVNSEIR [637] ce  -------------------------------------------------------- [403] ce6 -------------------------------------------------------- [400] is  -------------RKNGIQQTATSPIITFIRHHLQYKNVSSVQPVKTNAFVK---- [494]                                                              Alignment DetailsAlignment done with MAFFT FFT-NS-2 (v7.305b) aligner. MAFFT References
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