DRSC/TRiP Functional Genomics Resources

Multi Sequence Alignment :

Domains

Index TaxID Gene Name GeneID Protein ID Domain
start
Domain
stop
Domain
name
Domain
description
external_id
hs 9606 NUDT3 11165 NP_006694.1 19 143 NUDIX_DIPP2_like_Nudt4 diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase type 2 and similar proteins; cd04666 CDD:467551
hs 9606 NUDT3 11165 NP_006694.1 51 72 Nudix box propagated from UniProtKB/Swiss-Prot (O95989.1)
mm 10090 Nudt3 56409 NP_062811.1 51 72 Nudix box propagated from UniProtKB/Swiss-Prot (Q9JI46.1)
mm 10090 Nudt3 56409 NP_062811.1 19 143 NUDIX_DIPP2_like_Nudt4 diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase type 2 and similar proteins; cd04666 CDD:467551
rn 10116 Nudt3 294292 NP_001019414.1 51 72 Nudix box propagated from UniProtKB/Swiss-Prot (Q566C7.1)
rn 10116 Nudt3 294292 NP_001019414.1 19 143 NUDIX_DIPP2_like_Nudt4 diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase type 2 and similar proteins; cd04666 CDD:467551
xt 8364 nudt4 448180 NP_001005679.1 19 143 NUDIX_DIPP2_like_Nudt4 diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase type 2 and similar proteins; cd04666 CDD:467551
dr 7955 nudt3b 450013 XP_017211962.1 19 151 NUDIX_DIPP2_like_Nudt4 diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase type 2 and similar proteins; cd04666 CDD:467551
dm 7227 Aps 39226 NP_648421.1 19 143 NUDIX_DIPP2_like_Nudt4 diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase type 2 and similar proteins; cd04666 CDD:467551
ag 7165 Aps 1279315 XP_061514530.1 - - - - -
ce 6239 Y92H12BL.5 259365 NP_740784.1 26 146 NUDIX_DIPP2_like_Nudt4 diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase type 2 and similar proteins; cd04666 CDD:467551
is 6945 Aps 8034888 XP_002410734.1 18 127 NUDIX_DIPP2_like_Nudt4 diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase type 2 and similar proteins; cd04666 CDD:467551
sc 4932 DDP1 854334 NP_014806.1 33 181 NUDIX_DIPP2_like_Nudt4 diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase type 2 and similar proteins; cd04666 CDD:467551
sp 4896 aps1 2542890 NP_592840.1 45 203 NUDIX_DIPP2_like_Nudt4 diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase type 2 and similar proteins; cd04666 CDD:467551
at 3702 NUDT16 820440 NP_566428.1 21 158 NUDIX_DIPP2_like_Nudt4 diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase type 2 and similar proteins; cd04666 CDD:467551
ec 83333 rppH 947300 NP_417307.1 1 156 PRK00714 RNA pyrophosphohydrolase; Reviewed CDD:234820
ec 83333 nudE 947906 NP_417856.1 1 184 nudE adenosine nucleotide hydrolase NudE; Provisional; PRK11762 CDD:183303
ec 83333 nudK 947072 NP_416962.1 1 191 PRK15009 GDP-mannose pyrophosphatase NudK; Provisional CDD:184971
ec 83333 nudB 946383 NP_416379.1 4 150 nudB dihydroneopterin triphosphate pyrophosphatase; Provisional; PRK09438 CDD:236516
ec 83333 nudF 947519 NP_417506.1 9 209 nudF ADP-ribose pyrophosphatase NudF; Provisional; PRK10729 CDD:182682

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Alignment

Alignment done with MAFFT FFT-NS-2 (v7.305b) aligner. MAFFT References

Download raw alignment output file

Download fasta input file



Note:   &mbsp 2019, we've been having trouble with some alignments and are looking into the problem. If the alignment didn't work, please try again. If it still doesn't work, please download the fasta file and align off line. We're looking into it. Thanks.

hs  ----------------------------------------MMKLKSN----------------QTRTYDG--DGYKKRAACLCFR----------SE-SEEEVLLV---------SSSRH [42]
mm  ----------------------------------------MMKLKSN----------------QTRTYDG--DGYKKRAACLCFR----------SE-SEEEVLLV---------SSSRH [42]
rn  ----------------------------------------MMKLKSN----------------QTRTYDG--DGYKKRAACLCFR----------SE-SEEEVLLV---------SSSRH [42]
xt  ----------------------------------------MMKFKPN----------------QTRTYDR--EGFKKRAACLCFR----------NE-REDEVLLV---------SSSRY [42]
dr  ----------------------------------------MMKLKSN----------------QTRTYDG--DGYKKRAACLCFR----------ND-TEQEVLLV---------SSSRH [42]
dm  ----------------------------------------MVKEKPN----------------STRIYDK--DGFRRRAACICVK----------SE-NEAEVLLV---------TSSRR [42]
ag  ----------------------------------------MVKEKPN----------------SIRIYDK--DGYRRRAACICVR----------SE-AEAEVLLV---------TSSRR [42]
ce  ---MIS--------GW-----------------------KSRESERN----------------KVRLRDT--DGFRIRAAALCIK----------GTGKETLVLLV---------SGGKD [49]
is  -----------------------------------------MKEKPN----------------STRTYDE--DGFRRRAACLCVR----------RE--ETEILLV---------SSSSA [40]
sc  MGKTAD--------NHGPV--------------------RSETAREG----------------RENQVYSPVTGARLVAGCICLTP------------DKKQVLMI---------TSSAH [55]
sp  ---MLE--------NNGSVILMEPDHLRTA-------VNRSMTSREG----------------RTKNRFNPITGARLAAGVVALSA------------DKRKVLLV---------SSAKK [65]
at  ---MC-----------------------------------DLVARTG----------------RLQQRYE--DGSRLVAGCIPFRYVNSDKDGNSESGKVIQVLMI---------SSSSG [55]
ec  ---MID--------D---------------------------------------------------------DGYRPNVGIVICN-------------RQGQVMWA---------RRFGQ [30]
ec6 ---MLKPDNLPVTFGKNDVEIIARETLYRG-FFSL-----DLYR-----FRHRLFNGQMSHEVRREIFER-----GHAAVLLPFDP------------VRDEVVLIEQIRIAAY-DTSET [88]
                                                                                     :                    ::                

hs  PDRWIVPGGGMEPEE-EPSVAAVREVCEEAGV-----KGTLGRLVGIFENQ--------ERKH-----------------------------------RTYVYVLIV------------- [100]
mm  PDRWIVPGGGMEPEE-EPSVAAVREVCEEAGV-----KGTLGRLVGIFENQ--------ERKH-----------------------------------RTYVYVLIV------------- [100]
rn  PDRWIVPGGGMEPEE-EPSVAAVREVCEEAGV-----KGTLGRLVGIFENQ--------ERKH-----------------------------------RTYVYVLIV------------- [100]
xt  PDQWIVPGGGMEPEE-EPGGAAVREVYEEAGV-----KGKLGRLLGIFENQ--------DRKH-----------------------------------RTYVYVLTV------------- [100]
dr  PDKWIVPGGGMEPEE-EPNVAAAREVCEEAGV-----KGTLGRLVGIFENR--------DRKH-----------------------------------RTYVYVLIV------------- [100]
dm  PELWIVPGGGVEPEE-ESSVTAVREVLEEAGV-----VGDLGRCLGVFENN--------DHMH-----------------------------------RTEVFVMNV------------- [100]
ag  PELWIVPGGGVEPDE-EASLTATREVLEEAGV-----MGQLGRCLGVFENS--------EHMH-----------------------------------RTEVFVMVV------------- [100]
ce  GGKWVVPGGGIEKDE-CAEEAAHRELMEEAGV-----RATILKKIGMFQDD--------VRKH-----------------------------------RTQVFLMEV------------- [107]
is  PDRWIVPGGGLEPNE-EPSTAAMREVMEEGGV-----RGRLGRCLGTFENL--------ERKH-----------------------------------RTMVFILEV------------- [98]
sc  KKRWIVPKGGVEKDEPNYETTAQRETWEEAGC-----IGKIVANLGTVEDMRPPKDWN---KDIKQFENSRKDSEVAKH------------PPRT---EFHFYELEI------------- [139]
sp  HPSWVVPKGGWEADE-SVQQAALREGWEEGGL-----VGHITRSLGSFKDKRPTDTIDRRKKYLKQLMSKSSGNDVSTNTELGAEAEKLLLPPRA---ECEFFEVIV------------- [163]
at  PGL-LFPKGGWENDE-TVREAAAREAVEEAGV-----RGILMDFLGNYEFK--------SKSHQDEF------------------------SPEGL-CKAAMYALYV------------- [122]
ec  HS-WQFPQGGINPGE-SAEQAMYRELFEEVGL-----SRKDVRILASTRNWL-------RYKLPKRL--------VRWDT-----------KPVCIGQKQKWFLLQLVSGDAEINMQTSS [117]
ec6 PWLLEMVAGMIEEGE-SVEDVARREAIEEAGLIVK------------------------RTKPVLSF----------------------LASPGGTSERSSIMVGEV-D----------- [149]
            *  :  *        :*  **                                                                                           

hs  TEVLEDW----EDSVNI--------GRKREWF---KIEDAIKVL-QYHKPVQASYF---------ETLRQGYSANN-------------------------------------------G [152]
mm  TEVLEDW----EDSVNI--------GRKREWF---KIEDAIKVL-QCHKPVQASYF---------ETLRQGYPANN-------------------------------------------G [152]
rn  TEVLEDW----EDSVNI--------GRKREWF---KIEEAVKVL-QYHKPVQASYF---------EALRQGYSANN-------------------------------------------G [152]
xt  TEVLEDW----EDSVNI--------GRKREWF---KVEDALKVL-QCHKPVHAEYL---------EKLKLGCSPTN-------------------------------------------G [152]
dr  TEVLEDW----EDSVNIGKSSGLGFGRKREWF---KIDDAIQVL-QCHKPVQASYF---------TALQEGCLNSN-------------------------------------------G [160]
dm  TQELDEW----EDSRSI--------GRKRQWF---TIDDALSQL-ALHKPTQQHYL---------MQLQHSKTLDNTNRVVNATHPPKL------------------------------T [165]
ag  TQELDEW----EDSKTI--------GRKRQWF---SIEEAMSQL-ALHKPTQRHYL---------QQLRHSK-----HRTTSSSDPPPIISENDNDDFTSEPVMNNCTAPDDAAGEKDTT [190]
ce  SEELQTW----EENE---------YGRQRIWM---NVLEGKEKV-KQSHRAMLDAL---------TLLR--------------------------------------------------- [150]
is  TEELEEW----EDSKSI--------GRKRKWF---PIEEALRVL-SVSKPVQCNYV---------KLLMK-------------------------------------------------- [143]
sc  ENLLDKF----PECH----------KRHRKLY---SYTEAKQNLIDAKRPELLEAL-------NRSAIIKDDK----------------------------------------------- [188]
sp  ERLEDNY----PEMR----------KRRRKWM---SYQEAKEAL--TSRKDILAAL-------EKSSIIKEEN----------------------------------------------- [210]
at  KEELATW----PEHE----------TRTRKWL---TIEEAVE---SCRHPWMKDALVEGFCKWHKEKMVKGEEITGEH------------------------------------------ [180]
ec  TPEFDGW------------------RWVSYWY---PVRQVVSFKRDVYRRVMKEFA---------SVVMSLQE----------------------------------------------- [160]
ec6 ATTASGIHGLADENEDIRVHV-VSREQAYQWVEEGKIDNAASVI-AL------QWL-----QLHHQALKNEWA----------------------------------------------- [209]
                                          :                                                                                 

hs  TPVVAT----------------TYSVSAQSSM--SGIR---- [172]
mm  TPVVPT----------------TYS----SSV--SGIR---- [168]
rn  TPVLPT----------------TYS----SSM--SGIR---- [168]
xt  NSVVPPI----------PDNNSLYVTSAQTSSLPSTVR---- [180]
dr  TPLVATIG--------GGDLSPTYSIN-QSSV--SDMR---- [187]
dm  NAATPA-------------ASPTTA----------------- [177]
ag  TESTPTTPPACTTTVTDDDGEPTTVADTDSLPPTSTT----- [227]
ce  ------------------------------------------ [150]
is  NDKVP------------------------------------- [148]
sc  ------------------------------------------ [188]
sp  ------------------------------------------ [210]
at  ------------------------------------------ [180]
ec  NTPKPQNA--------------------------SAYRRKRG [176]
ec6 ------------------------------------------ [209]
                                              


Alignment Details

Alignment done with MAFFT FFT-NS-2 (v7.305b) aligner. MAFFT References
  • Strategy: Auto
  • Scoring Matrix: BLOSUM62
  • Gap Penalty: 1.53
  • Offset Value: 0.0