Reagents and Results:
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Cell Screening dsRNAs (1)
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Hits in 1 of 86 screens (Click title to view all hits in that screen)
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Nuclear targeting factor of Mad (pmid: 17785517 )
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General dsRNA/Amplicon Information
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| Amplicon ID: |
DRSC16189 |
Sequence: |
CGCTTCGCATTCTAGACCATCGCGTGTTCGTAAACGGCGAGATCGAGGCCTTTCTTGAGAACTTCGAGGTGCGGCGCAACGACAGCGAAGTGGAGAAACTTTTCCAGGTCACCGAAACAGTGGGATCTCTGAAGTACGATCTGTCCCGGTGCAGTGCAACCGGAAGGGGTAGCGGAGCCGAGAACCTCGCCCAACTGGACACGGAAGTCAGCCATCTGCTGGACGGGGTCAACGCACTCTTGGCGAAAGCGAA |
| "R" Primer: |
CGCTTCGCATTCTAGACC |
| "S" Primer: |
TTCGCTTTCGCCAAGAG |
| Amplicon Length: |
253 |
| Target Gene(s): |
Muted, CG7071 |
| Potential Off-Target Number: |
0 |
| CAR/CAN repeats: |
None |
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dsRNA Matches to Transcripts and Exons
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| Transcript |
FBtr0110878 |
| Exon 2 length |
281 |
dsRNA Position Relative to Exon 2: 16 - 268 |
| Transcript |
FBtr0084212 |
| Exon 2 length |
314 |
dsRNA Position Relative to Exon 2: 49 - 301 |
| Transcript |
FBtr0084211 |
| Exon 3 length |
281 |
dsRNA Position Relative to Exon 3: 16 - 268 |
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Historical Amplicon Information
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| HFA Amplicon ID: |
HFA16189 |
| Amplicon Nickname: (Old Oligo Name) |
CG7071 |
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Click
here for amplicon info documentation
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Genomic Position Information (based on Flybase, release 5.28)
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| Chromosome Length: |
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| Start: |
18186744 |
| End: |
18190996 |
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Cell Screen Follow-Up dsRNAs (1)
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General dsRNA/Amplicon Information
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| Amplicon ID: |
DRSC36270 |
Sequence: |
AAGCAAAGAGGCCACACACTGCCCACCTCTATTAGGATTATCAAGGATGCGGGCTTGGAGTACAAACGACCAAAACTCAATTACGAGCTGTTGACAAAACTAACTGAAAACCTAGCCGACAAACCAGAAGAACCTGCTAAGGATAAATCGGAACCAGATTCAGGGGTCAAGGATAGTGATGACGCAAAGTCAACAAGGGAGGTTAAACATTTCCTATACTTAACCGACCTGCACTGGCTCTCAAAAACACTGGCTGAACTGCGTCGTCAGGATCACTGCCAAGTCTTTCTGCATCAGCTAATTGAGTCCTGTGATCTGCTCCTGCCCGAAAACGAAATGAAGCCGCGCAATCCTGAGCTAGAAGCG |
| "R" Primer: |
AAGCAAAGAGGCCACACACT |
| "S" Primer: |
CGCTTCTAGCTCAGGATTGC |
| Amplicon Length: |
366 |
| Target Gene(s): |
CG7071, Muted |
| Potential Off-Target Number: |
0 |
| CAR/CAN repeats: |
None |
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dsRNA Matches to Transcripts and Exons
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| Transcript |
FBtr0084212 |
| Exon 4 length |
774 |
dsRNA Position Relative to Exon 4: 300 - 665 |
| Transcript |
FBtr0084211 |
| Exon 4 length |
774 |
dsRNA Position Relative to Exon 4: 300 - 665 |
| Transcript |
FBtr0110878 |
| Exon 3 length |
774 |
dsRNA Position Relative to Exon 3: 300 - 665 |
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Genomic Position Information (based on Flybase, release 5.28)
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| Chromosome Length: |
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| Start: |
18187375 |
| End: |
18191740 |
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Transgenic RNAi Project (TRiP) Fly Stocks (0)
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Gene Information for
Muted:
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| Symbol: |
Muted |
Gene Name: |
Muted |
| Flybase ID: |
FBgn0083967 |
Entrez Gene: |
4379860 |
| Synonyms: |
Dromel_CG7071_FBtr0084211_uORF, muted, CG34131, NP_001036744, CG7071, Muted ortholog |
| Old Flybase IDs: |
FBgn0063677, FBgn0038949 |
| NCBI Nucleotide Accs: |
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| NCBI Protein Accs: |
ABI31195, AHN57463 |
| UniProt Accs: |
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| Gene Ontology IDs: |
GO:0003674, GO:0031083, GO:0008150, GO:0030133 |
| Protein Domains: |
IPR017243 |
| Unigene ID: |
Dm.20710 |
| RefSeq IDs: |
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| Homologene Group: |
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| Other External Accs: |
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| Kc167: |
19.0697 - Expressed |
BG3: |
27.1892 - Expressed |
| Clone 8: |
28.3823 - Expressed |
S2-DRSC: |
20.6211 - Expressed |
| S2R+: |
43.5384 - Expressed |
