Reagents and Results:
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Cell Screening dsRNAs (1)
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Hits in 1 of 88 screens (Click title to view all hits in that screen)
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CRACM1 Is a Plasma Membrane Protein Essential for Store-Operated Ca2+ Entry (pmid: 16645049 )
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General dsRNA/Amplicon Information
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| Amplicon ID: |
DRSC17805 |
Sequence: |
TGTGGTGGCCGGCTTAAAGAACCTGGGTGCCATCATTTCGCTGCCACTCACCAAACTGCTCATTGCCAATTCCTTGAAACTGACGCTCCATCCAGATGCCAGTGAGTTGGAAGCTGGAAATTGGTGTTTCGCGTAGACCTAATCCTAATATGTACACCCCCACAGCCATTGCTCCGGTGCCCGAGCTGTATGCCAAGAACGCCGCCTGCGCCAAACAGAGCGAGTACGCGGTGGTCACCCTCTTCGCCCTGGGCACCAAGCACGGCTGGGATGGCCTTCAATTGCGCCAGCAGCTGGAGCAACTCAACCTCGATGCAGCTGCCGTCGACGAGCTGAGTCGCGTTTACGAGGACAGCCGCAAGGATCTAATTCTCCGCCAACTGCAAATAGGCCATAGCTTTCCGCACATTACCGACATCCAGTGGCGCATCGTGTGCGACGTGAAGTCTTCCACCTCGGACTGCAGCACGGGCGCGGCCTGCTTCCACATCAATCTGGGCAACTTTCGGCAGAGCAGCGGCGAGCGGGTGACCATCGTTGAGTTTGTCTGCAATGCCGAGGAG |
| "R" Primer: |
TGTGGTGGCCGGCTTAA |
| "S" Primer: |
CTCCTCGGCATTGCAGA |
| Amplicon Length: |
563 |
| Target Gene(s): |
CG12106 |
| Potential Off-Target Number: |
0 |
| CAR/CAN repeats: |
None |
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dsRNA Matches to Transcripts and Exons
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| Transcript |
FBtr0071306 |
| Exon 2 length |
1078 |
dsRNA Position Relative to Exon 2: -164 - 398 |
| Exon 1 length |
266 |
dsRNA Position Relative to Exon 1: 166 - 728 |
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Historical Amplicon Information
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| HFA Amplicon ID: |
HFA17805 |
| Amplicon Nickname: (Old Oligo Name) |
CG12106 |
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Click
here for amplicon info documentation
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Genomic Position Information (based on Flybase, release 5.28)
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| Chromosome Length: |
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| Start: |
9086140 |
| End: |
9090702 |
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Transgenic RNAi Project (TRiP) Fly Stocks (1)
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Short Hairpin HMC06630
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General Hairpin Information
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| TRiP #: |
HMC06630 |
BDSC Stock #: |
80394 |
| Gene ID: |
CG12106 |
Gene Name: |
CG12106 |
| Vector: |
VALIUM20 |
Hairpin ID: |
SH10416.N |
| Classifications: |
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Sense Oligo: |
ctagcagtCTGAGCACAGACGACGAGCAAtagttatattcaagcataTTGCTCGTCGTCTGTGCTCAGgcg |
| Antisense Oligo: |
aattcgcCTGAGCACAGACGACGAGCAAtatgcttgaatataactaTTGCTCGTCGTCTGTGCTCAGactg |
| Insertion Location: |
attP40 |
Gene Information for
CG12106:
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| Symbol: |
CG12106 |
Gene Name: |
CG12106 |
| Flybase ID: |
FBgn0030100 |
Entrez Gene: |
31856 |
| Synonyms: |
BcDNA:GH03263, CG12106 |
| Old Flybase IDs: |
FBgn0064980 |
| NCBI Nucleotide Accs: |
AI063444, AW940126, BT001383, BT021322 |
| NCBI Protein Accs: |
AAN71138, AAX33470, AAG22414 |
| UniProt Accs: |
Q9I7W2, Q8IH72 |
| Gene Ontology IDs: |
GO:0005575, GO:0003674, GO:0008150 |
| Protein Domains: |
IPR009886, IPR017920 |
| Unigene ID: |
Dm.20743 |
| RefSeq IDs: |
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| Homologene Group: |
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| Other External Accs: |
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| Kc167: |
9.48946 - Expressed |
BG3: |
8.43715 - Expressed |
| Clone 8: |
9.43087 - Expressed |
S2-DRSC: |
7.62176 - Expressed |
| S2R+: |
4.19358 - Weakly expressed |
