DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCO2 and SCO1

DIOPT Version :10

Sequence 1:NP_005129.2 Gene:SCO2 / 9997 HGNCID:10604 Length:266 Species:Homo sapiens
Sequence 2:NP_009593.1 Gene:SCO1 / 852325 SGDID:S000000241 Length:295 Species:Saccharomyces cerevisiae


Alignment Length:288 Identity:102/288 - (35%)
Similarity:147/288 - (51%) Gaps:39/288 - (13%)


- Green bases have known domain annotations that are detailed below.


Human     1 MLLLTRSPTAWHRLSQLKPRVLPGTLGGQALHLRSWLLSRQGPAETGGQGQPQGPGLRTRLLITG 65
            ||.|:||...  ||.||....|.|. |.:       ||:::|........|..|....:|:.:.|
Yeast     1 MLKLSRSANL--RLVQLPAARLSGN-GAK-------LLTQRGFFTVTRLWQSNGKKPLSRVPVGG 55

Human    66 L--------------FGAG--------LGGAW-LALRAEKERLQQQKRTEALR---QAAVGQGDF 104
            .              |..|        :|||. .....||.||:.||..||.|   :.::| |.|
Yeast    56 TPIKDNGKVREGSIEFSTGKAIALFLAVGGALSYFFNREKRRLETQKEAEANRGYGKPSLG-GPF 119

Human   105 HLLDHRGRARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDP 169
            ||.|..|....:.:..|::.::||||::|||||||||:||...:..|.::.|: .:||:|||.||
Yeast   120 HLEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGI-TLQPLFITCDP 183

Human   170 ERDDVEAMARYVQDFHPRLLGLTGSTKQVAQASHSYRVYYNAGPK-DEDQDYIVDHSIAIYLLNP 233
            .||....:..|:.||||.:|||||:..:|..|...||||::..|. ...|||:|||||..||::|
Yeast   184 ARDSPAVLKEYLSDFHPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDP 248

Human   234 DGLFTDYYGRSRSAEQISDSVRRHMAAF 261
            :|.|.|..||:...:...|.:..|:.::
Yeast   249 EGQFVDALGRNYDEKTGVDKIVEHVKSY 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCO2NP_005129.2 SCO 101..242 CDD:239266 64/141 (45%)
SCO1NP_009593.1 SCO 115..257 CDD:239266 65/143 (45%)

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