DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCO2 and Sco2

DIOPT Version :10

Sequence 1:NP_005129.2 Gene:SCO2 / 9997 HGNCID:10604 Length:266 Species:Homo sapiens
Sequence 2:NP_001104758.1 Gene:Sco2 / 100126824 MGIID:3818630 Length:255 Species:Mus musculus


Alignment Length:266 Identity:208/266 - (78%)
Similarity:224/266 - (84%) Gaps:14/266 - (5%)


- Green bases have known domain annotations that are detailed below.


Human     2 LLLTRSPTAWHRLSQLKPRVLPGTLGGQALH--LRSWLLSRQGPAETGGQGQPQGPGLRTRLLIT 64
            :||...|.||.:|||.||  |....||:.||  .|.|          .||||.||||||||||||
Mouse     1 MLLALGPKAWPKLSQFKP--LLRISGGETLHRNSRHW----------AGQGQRQGPGLRTRLLIT 53

Human    65 GLFGAGLGGAWLALRAEKERLQQQKRTEALRQAAVGQGDFHLLDHRGRARCKADFRGQWVLMYFG 129
            .|||||||.||||.|||||:.:||:|||||||||||||||.||||:|:.||||||||||||||||
Mouse    54 ALFGAGLGWAWLAARAEKEQWRQQQRTEALRQAAVGQGDFSLLDHKGQPRCKADFRGQWVLMYFG 118

Human   130 FTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGS 194
            ||||||||||||||||||||:|||||.||.|||||||||||||||.|||||||:|||||||||||
Mouse   119 FTHCPDICPDELEKLVQVVRKLEAEPDLPLVQPVFITVDPERDDVAAMARYVQEFHPRLLGLTGS 183

Human   195 TKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHMA 259
            |:|||.||.:|||||:||||||||||||||||||||||||||||||||||||||||.:|:|||:|
Mouse   184 TEQVAHASRNYRVYYSAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQIVESIRRHIA 248

Human   260 AFRSVL 265
            ||.|||
Mouse   249 AFHSVL 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCO2NP_005129.2 SCO 101..242 CDD:239266 126/140 (90%)
Sco2NP_001104758.1 SCO 90..231 CDD:239266 126/140 (90%)

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