DRSC/TRiP Functional Genomics Resources

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Protein Alignment HNRNPDL and Hrb27C

DIOPT Version :10

Sequence 1:NP_112740.1 Gene:HNRNPDL / 9987 HGNCID:5037 Length:420 Species:Homo sapiens
Sequence 2:NP_476869.1 Gene:Hrb27C / 33968 FlyBaseID:FBgn0004838 Length:421 Species:Drosophila melanogaster


Alignment Length:422 Identity:109/422 - (25%)
Similarity:161/422 - (38%) Gaps:154/422 - (36%)


- Green bases have known domain annotations that are detailed below.


Human   144 QQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
            :.:.||:|:|||||:|::::|:.|..|||:::||.:..:..:|||||||||.|.|..:|:.||:.
  Fly     3 EDERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67

Human   209 KEHKLDGKLIDPKRAKALKGKEPPK----KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTK 269
            ..|.|||:.||||.......::|.|    |||:|||..:.:|..::.:|..:|::..:.:..|.:
  Fly    68 GPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQE 132

Human   270 TNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKEVYRQQQQQQKGGRGAAAGGRGG 334
            ..:.|||.|:::.:|..|:.:...||..:...:.|||.|:|::        ..||:.:.....||
  Fly   133 KKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRD--------GSGGQNSNNSTVGG 189

Human   335 TRGR---------------GRGQGQNWN-------------------QGFNNYYDQ---GYGNYN 362
            ..|:               ...||||..                   ||:.....|   ||||..
  Fly   190 AYGKLGNECSHWGPHHAPINMMQGQNGQMGGPPLNMPIGAPNMMPGYQGWGTSPQQQQYGYGNSG 254

Human   363 --------------------SAYGGDQNYSGYGGYDY---------------------------- 379
                                |.|.|.|...||||||.                            
  Fly   255 PGSYQGWGAPPGPQGPPPQWSNYAGPQQTQGYGGYDMYNSTSTGAPSGPSGGGSWNSWNMPPNSA 319

Human   380 ---------------------------------------TG-----------YNYGNYGYGQGYA 394
                                                   ||           |:||.||.|..| 
  Fly   320 GPTGAPGAGAGTATDMYSRAQAWATGGPSTTGPVGGMPRTGPGNSASKSGSEYDYGGYGSGYDY- 383

Human   395 DYSGQ-----QSTYGKASRGG-GNHQNNYQPY 420
            |||..     .|.||...|.. ||..:...||
  Fly   384 DYSNYVKQEGASNYGAGPRSAYGNDSSTQPPY 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HNRNPDLNP_112740.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..83
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 96..120
RRM1_hnRPDL 149..224 CDD:410152 37/74 (50%)
RRM2_hnRPDL 234..308 CDD:409998 21/73 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 313..348 9/68 (13%)
Necessary for interaction with TNPO1. /evidence=ECO:0000269|PubMed:9524220 342..420 39/203 (19%)
Necessary for its nuclear import and export 396..420 8/29 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 398..420 6/27 (22%)
Hrb27CNP_476869.1 RRM1_hnRNPA_hnRNPD_like 9..80 CDD:409763 34/70 (49%)
RRM2_DAZAP1 94..173 CDD:409765 22/78 (28%)
Blue background indicates that the domain is not in the aligned region.

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