DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CDC42 and Rac2

DIOPT Version :10

Sequence 1:NP_001782.1 Gene:CDC42 / 998 HGNCID:1736 Length:191 Species:Homo sapiens
Sequence 2:NP_648121.1 Gene:Rac2 / 38831 FlyBaseID:FBgn0014011 Length:192 Species:Drosophila melanogaster


Alignment Length:193 Identity:131/193 - (67%)
Similarity:153/193 - (79%) Gaps:3/193 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYD 65
            ||.|||||||||||||||||||||||.||.||:|||||||:..||:..:|..|||:|||||||||
  Fly     1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYD 65

Human    66 RLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLA 130
            ||||||||||||||:|||:|:|:|||||:.||.||:.||||..|.:||||::|||||..|||||.
  Fly    66 RLRPLSYPQTDVFLICFSLVNPASFENVRAKWFPEVRHHCPSVPIILVGTKLDLRDDKQTIEKLK 130

Human   131 KNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEP--PEPKKSRRCVLL 191
            ..|..|||......:|:::.||||:|||||||||||.||||||.:.|.|  ..||: .:|.||
  Fly   131 DKKLTPITYPQGLAMAKEIAAVKYLECSALTQKGLKTVFDEAIRSVLCPVVRGPKR-HKCALL 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDC42NP_001782.1 Cdc42 3..177 CDD:206664 122/173 (71%)
Effector region. /evidence=ECO:0000255 32..40 6/7 (86%)
Rac2NP_648121.1 Rac1_like 3..176 CDD:206663 122/172 (71%)

Return to query results.
Submit another query.