DRSC/TRiP Functional Genomics Resources

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Protein Alignment CDC42 and Rho1

DIOPT Version :10

Sequence 1:NP_001782.1 Gene:CDC42 / 998 HGNCID:1736 Length:191 Species:Homo sapiens
Sequence 2:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster


Alignment Length:193 Identity:106/193 - (54%)
Similarity:140/193 - (72%) Gaps:3/193 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     1 MQTI--KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 63
            |.||  |.|:|||||.|||||||.::.::||..||||||:||...:.:.|:...|.|:|||||||
  Fly     1 MTTIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65

Human    64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEK 128
            ||||||||||.|||.|:||||.||.|.||:.|||.||:.|.||..|.:|||.:.|||:||:||..
  Fly    66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIRD 130

Human   129 LAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKKSRRCVLL 191
            |||.||:|:.|:....:|..:.|..|:||||.:::|:::||:.|..|||:..:.||: ||:||
  Fly   131 LAKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFETATRAALQVKKRKKT-RCLLL 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDC42NP_001782.1 Cdc42 3..177 CDD:206664 97/175 (55%)
Effector region. /evidence=ECO:0000255 32..40 6/7 (86%)
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 95/173 (55%)

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