DRSC/TRiP Functional Genomics Resources

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Protein Alignment RBX1 and lmgA

DIOPT Version :10

Sequence 1:NP_055063.1 Gene:RBX1 / 9978 HGNCID:9928 Length:108 Species:Homo sapiens
Sequence 2:NP_001097122.1 Gene:lmgA / 5740853 FlyBaseID:FBgn0250903 Length:85 Species:Drosophila melanogaster


Alignment Length:83 Identity:31/83 - (37%)
Similarity:44/83 - (53%) Gaps:8/83 - (9%)


- Green bases have known domain annotations that are detailed below.


Human    24 VKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWL 88
            :|.|..||.|.|....:||.|||......|.||     :...::|.:.||||:|.||.|||.:||
  Fly     5 IKSWTGVATWRWIANDENCGICRMSFESTCPEC-----ALPGDDCPLVWGVCSHCFHMHCIVKWL 64

Human    89 KTRQV---CPLDNREWEF 103
            ..:.:   ||:..:.|:|
  Fly    65 NLQPLNKQCPMCRQSWKF 82

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RBX1NP_055063.1 mRING-H2-C3H2C2D_RBX1 40..101 CDD:438148 23/63 (37%)
lmgANP_001097122.1 RING_Ubox 1..82 CDD:473075 30/81 (37%)

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