DRSC/TRiP Functional Genomics Resources

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Protein Alignment RBX1 and Roc1b

DIOPT Version :10

Sequence 1:NP_055063.1 Gene:RBX1 / 9978 HGNCID:9928 Length:108 Species:Homo sapiens
Sequence 2:NP_652613.1 Gene:Roc1b / 53445 FlyBaseID:FBgn0040291 Length:122 Species:Drosophila melanogaster


Alignment Length:107 Identity:70/107 - (65%)
Similarity:83/107 - (77%) Gaps:5/107 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     5 MDVDTPSGTNSG----AGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATS 65
            ||.:....:.||    |..:||.||||.|.|:|.||:.||||||||||||:|||||||: .:|..
  Fly    16 MDFNDEEPSCSGGAVQARTERFVVKKWVAHAMWGWDVAVDNCAICRNHIMNLCIECQAD-PNANQ 79

Human    66 EECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYG 107
            :|||||||.||||||:|||:||||||.||||||:||.:||||
  Fly    80 DECTVAWGECNHAFHYHCIARWLKTRLVCPLDNKEWVYQKYG 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RBX1NP_055063.1 mRING-H2-C3H2C2D_RBX1 40..101 CDD:438148 47/60 (78%)
Roc1bNP_652613.1 mRING-H2-C3H2C2D_RBX1 55..115 CDD:438148 47/60 (78%)

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